Gene CPS_4894 details

Gene Information

• Locus tag: CPS_4894
• ID: 3522616
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 5187337
• End bp: 5188023
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637287333
• Product: hypothetical protein
• Protein accession: YP_271533
• Protein GI: 71282143
• COG category: [R] General function prediction only
• COG ID: [COG2992] Uncharacterized FlgJ-related protein

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTACGTC CTTCAAATAA AATCAAAATA ATTATCGCTA CAATACTGCT CGTTATCATT 
GCATCGGTTA TTTACAGTGT TACTCAACAG GAGCCTGAGC TCCCTAAAAT GACAGTACAA 
GAGAAAAAAG CAAGATTTAG AGCGTTAATC ATTCCTGCTG TTAACATTGT TTACACGAAA 
CTAATGGCTA GATATGAAGA GATTAAAACA ACACTTGATG CCGGTAAAAC GAGTGCTGAG 
ATTGAAAAAT TAAAAGTAGA ATACAAAGCC ACTACCAATG AAAAATTGCT CATGGCACTT 
AAACCTCACC CTAAAAGTAT TGCCATCGCA CAAGCGGCAA TAGAAAGTTC TTGGGCTACC 
TCACGCTTTT TTAGAGTCGC TAATAATATC TTTGGTGTTT GGTCTTTTGA CAAAAATGAA 
CCTAGGGTTG CTGCTTTAAA AATGCGTGGC GACAAAACTA TTTGGGTAAA GAAATACAAT 
TCTATTGAAG ATGCTATAGT CGATTACTAT CGCACTGTGG GACGTAGCAG CGCTTTTGCT 
GAGTTTAGAG AAGCTAGAAT GCAAACAAAC GACCCTTTTA TACTGGTTAC TAAATTGGAT 
CGTTATTCTG AAAAAGGTAG TCTTTATGGT GAAGAGCTTA CTTCAATTAT CAAGTTCAAT 
AAATTTAATA AGTATGACGC TGACTAA 

 

Protein sequence

MLRPSNKIKI IIATILLVII ASVIYSVTQQ EPELPKMTVQ EKKARFRALI IPAVNIVYTK 
LMARYEEIKT TLDAGKTSAE IEKLKVEYKA TTNEKLLMAL KPHPKSIAIA QAAIESSWAT 
SRFFRVANNI FGVWSFDKNE PRVAALKMRG DKTIWVKKYN SIEDAIVDYY RTVGRSSAFA 
EFREARMQTN DPFILVTKLD RYSEKGSLYG EELTSIIKFN KFNKYDAD