Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_3720 |
Symbol | |
ID | 3519848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 3876683 |
End bp | 3877693 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637286167 |
Product | putative glycosyl hydrolase |
Protein accession | YP_270387 |
Protein GI | 71279392 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG5309] Exo-beta-1,3-glucanase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAGA AACACAGTGA TAAAGTAGCA ACAATTAGTT CAATGAATTT AAGCCATGCC AATGCTATTT GTTATTCTGG CTATCGTGAG GGACAAAATC CAAGAGAGGG CATTTATCCA ACGTATGACG AAGTTAAGGA AGACTTACTT ATACTAGCAA GCAATTGGAA TTACCTTCGT ATTTACGATT GTGGACCACA TGCTGAAATT GTTTTAGATG TTATTCGTAT AGAAGCATTA CATTTCAAAG TAATGCTCGG TGTTGATATG GCTGCTGAAA TGAGTAACCC TCATTGTCCA TGGGGTGCTG AATTTAGCGA AGAAACTCTT AGTGCTAACC GACAGAATAA CTGTAATGAA ATACATAAAA TGATCGAGTT ATCATTAAAG TATGATGACA TTGTTTTCTC AGTATCTGTC GGTAATGAAG CTAGTGTTGA ATGGACCGAT CATATGGTGC CAGTAGATAG ACTAGTGAAT TATGTTCGTC AAATCAAAAA AGAAATTAAA CAACCTGTTA CTTTTTGCGA AAACTACGTT CCATGGACGT ACAAATTGGA GCCTTTGGTT GCTGAATTAG ATTTTATTTC CATTCATACT TATCCTGCAT GGGAATTTAG AACGATGGAA GATGCGCTCG AATATACCAA ACAAAATTAT TATAGTGTGG CAAATCATTA CCCTGATAAG CCAGTGATTA TTACTGAAGC GGGTTGGACA ACGGCATCAA ATGGCAGGGG TATAGAACCG TGGAATGCTA ACGAAGACTT ACAGGCTCAT TATTATGAAC AATTGCTTGC ATGGACAACA CAAGAGAAAA TATTAACGTT TGTCTTTGAA GCTTTTGATG AACCATGGAA GGGCTCGTCA GATCCACTAG AGCCAGAAAA ACATTGGGGA TTGTTTTATG TTGATCGCAC ACCTAAGTTA GTCATGAAAG ACATATTCCC CAGAAAAACA ACTCATGCAG ATACAATCGT TAATATTAAT ACAAAGGATG AAGTGGCCTA A
|
Protein sequence | MFKKHSDKVA TISSMNLSHA NAICYSGYRE GQNPREGIYP TYDEVKEDLL ILASNWNYLR IYDCGPHAEI VLDVIRIEAL HFKVMLGVDM AAEMSNPHCP WGAEFSEETL SANRQNNCNE IHKMIELSLK YDDIVFSVSV GNEASVEWTD HMVPVDRLVN YVRQIKKEIK QPVTFCENYV PWTYKLEPLV AELDFISIHT YPAWEFRTME DALEYTKQNY YSVANHYPDK PVIITEAGWT TASNGRGIEP WNANEDLQAH YYEQLLAWTT QEKILTFVFE AFDEPWKGSS DPLEPEKHWG LFYVDRTPKL VMKDIFPRKT THADTIVNIN TKDEVA
|
| |