| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_3617 |
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| Symbol | sdaA |
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| ID | 3519950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 3753473 |
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| End bp | 3754849 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286065 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_270285 |
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| Protein GI | 71279491 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0736152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAGTG TATTTGATAT GTTTTCTATT GGCATAGGTC CATCAAGCTC ACATACAGTG
GGCCCTATGA AAGCCGCGAA ACTTTTCGTT GATGAATTAG TTAAACAAAA TTTATTAACT
AGTGTCGACA GAGCTAAATG TGAACTATTC GGCTCATTAG GACAAACAGG TATTGGCCAT
GGTACGGGTA AAGCTGTAAT TTTAGGCTTT TCTGGTCAAA CACCGGAAAA TATCCCTGTT
GAGTCAATAG AGTCGACCTT AGCCGAAGTT GTAAGCAGCC AAAAAATATC ACTCAATGGT
ACTCATGAAG TCGATTTCCC TAAAGATGAC GCTATTATTT ATCATCGTAA GAAAACATTG
CCCGCTCATT CTAATGCCAT GACTTTGTAT GCCTATCAAG GCGATACCTT GGTATTAGAA
AAGACTTATT ATTCTATTGG CGGTGGCTTT ATTGTAGAAG ACTGTGACTT CGAAAAAGAA
AAAGATAAAG CATTATCTCT ACACACCAAT ATCAATCCTC CGCATGTTTT TACTACTGGC
GATAAATTAC TCCATGAAGC TAAAGTGCAT GGTTTAAGCA TTAGTACCAT TATGATGAAT
AATGAAAAGT GCTTAAACGA TGAAGCGACC ATACGCACTA AATTAATTGA AATTTGGGAT
GCGATGAAAG CGAGTGTTGA CCGCGGTATT GCTACTGAAG GTATTCTACC TGGTGGTCTA
AACTTAAATC GTAGAGCCCC TGCTCTTCAT CGCTCCTTGA TGGTAGAAAA TTCTAACGAT
CCACTTACCG CTATGGATTG GGTTAACTTG TTCGCAATGG CGGTAAATGA AGAAAATGCT
GCCGGAAGCC GCGTAGTTAC AGCACCAACA AACGGCGCAG CAGGTATTAT TCCTGCTGTA
CTTTGTTACT ACGACAAGTT TGTTAAGCCA GTATCTGATG ATGATTGTAT TCGTTACTTA
CTTACCGCAG CAGCCATTGG TATTTTATAC AAGACTAACG CTTCTATTTC TGGCGCAGAA
GTTGGCTGCC AGGGTGAAGT TGGTGTAGCT TGTTCAATGG CTGCTGGCGC ATTAACTGAA
ATTTTGGGTG GTACTCCCAT TCAAGTAGAA AATGCAGCTG AAATAGGTAT GGAACATAAC
TTAGGATTAA CATGCGATCC AGTTGGCGGC TTAGTACAAG TACCTTGTAT TGAACGTAAT
GCGATGGGCT CAGTAAAAGC AATTAATGCT TCTCGTTTAG CACTTCGTGG TAATGGCACA
TCAAAAGTAT CTTTAGATAA AGTAATCAAA ACTATGTGGG AAACTGGTAA TGATATGAAA
ACTAAATATA AAGAAACTTC ACGTGGTGGT TTAGCGGTTA ATATTATCGA GTGTTAG
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| Protein sequence | MISVFDMFSI GIGPSSSHTV GPMKAAKLFV DELVKQNLLT SVDRAKCELF GSLGQTGIGH
GTGKAVILGF SGQTPENIPV ESIESTLAEV VSSQKISLNG THEVDFPKDD AIIYHRKKTL
PAHSNAMTLY AYQGDTLVLE KTYYSIGGGF IVEDCDFEKE KDKALSLHTN INPPHVFTTG
DKLLHEAKVH GLSISTIMMN NEKCLNDEAT IRTKLIEIWD AMKASVDRGI ATEGILPGGL
NLNRRAPALH RSLMVENSND PLTAMDWVNL FAMAVNEENA AGSRVVTAPT NGAAGIIPAV
LCYYDKFVKP VSDDDCIRYL LTAAAIGILY KTNASISGAE VGCQGEVGVA CSMAAGALTE
ILGGTPIQVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGSVKAINA SRLALRGNGT
SKVSLDKVIK TMWETGNDMK TKYKETSRGG LAVNIIEC
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