Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_2804 |
Symbol | |
ID | 3518766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 2932107 |
End bp | 2933141 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637285257 |
Product | BNR repeat-containing protein |
Protein accession | YP_269516 |
Protein GI | 71278627 |
COG category | [R] General function prediction only |
COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.354775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAT TAGTTGCTTT TGCAGTTATA TATTTTATCT CGATTTCTCC TGTTTGTGCT GAAAATACAG CGTCAACTAT CAATATCCCA ACTCCAGCAA TAGAGTCTCC ATTAGCAAGT AAGTCATTAT TATTAGACAT TTCACTTATT GGTCAAGAAA AGCTAGTAAC GGTCGGACAG CATGGCCATA TATTACTTTC TAACGACGGT AAAAAATGGC AACAAGCCAA TGTACCTGTA CAAGTTACAT TAACCAATGT GTTCTTTTTA AATGAACAGT TAGGTTGGGC TGTTGGTCAT GACGCAACGA TATTGCACAG CCAAGATGGT GGGCTCAATT GGCAAGTTCA ACAATATTTA CCTTTACTAG AAAAACCCCT TTTTGATATT TATTTTAAAA ACCCTCAGCA GGGAATTGCT GTTGGTGCTT ATGGCCAGGT ATTTCGCACC AATGATGGTG GTAGCACTTG GCAAAACGAA TTTCATCAAG AGATTTTGTT AGCTGATGAT GTTGAATACC TTAATGAATT AAAGGCTGAA GATGAAGCCG CTTATCTAGA CGAGATTACC TTCATTTTGC CGCACTTTAA TCGTTTGGTT CAAGACGGTG GCAGTTTATT TCTATTAGGT GAAACAGGGT TATTGGCAAA AAGTGATGAC TTTGGCCTGA CCTGGCAACA ATTTGATAAC TTTTATCAAG GTTCTTTTTT CTCATTGGCG CGAACGAAAA CGGGTAATGT TTTAGTCGCA GGCCTTCGTG GCCATGTTTT TCGTAGCCTC AATCATGGTT CGCAGTGGGA TGAAGTTCCC ACCAATACCA CTGCATTATT AAATGATATT GTTTTTGCTA ATGATGAGCG AATTTTCATT CTAGGAAACA ATGGTATGTT GCTTATTAGC ACCGACGATG GTGAAAGTTT TAGCAAAATA CCTCAGCAAG ATGGAAAAAC GTTAATCGCG GGTGTGTGGT TTAAAGGTCA GTTAATTGCA GTCTCTGATG TTGGTATTAA GGTAGTTGAT TTATCTCAAG AATAA
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Protein sequence | MRLLVAFAVI YFISISPVCA ENTASTINIP TPAIESPLAS KSLLLDISLI GQEKLVTVGQ HGHILLSNDG KKWQQANVPV QVTLTNVFFL NEQLGWAVGH DATILHSQDG GLNWQVQQYL PLLEKPLFDI YFKNPQQGIA VGAYGQVFRT NDGGSTWQNE FHQEILLADD VEYLNELKAE DEAAYLDEIT FILPHFNRLV QDGGSLFLLG ETGLLAKSDD FGLTWQQFDN FYQGSFFSLA RTKTGNVLVA GLRGHVFRSL NHGSQWDEVP TNTTALLNDI VFANDERIFI LGNNGMLLIS TDDGESFSKI PQQDGKTLIA GVWFKGQLIA VSDVGIKVVD LSQE
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