Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1983 |
Symbol | |
ID | 3521052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 2053311 |
End bp | 2054036 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637284445 |
Product | LamB/YcsF family protein |
Protein accession | YP_268713 |
Protein GI | 71280585 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTAA ACTGCGATTT AGGTGAGAGT TTTGGTGCTT GGTCTATGGG ACTCGATAAT GAAGTTATGC CTCATATTGA TCAGGCAAAT ATTGCCTGCG GCTTTCATGC TGGTGATCCT TTAGTGATGC AAAATACGTT GGCATTAGCC AAGCAATTCC AAGTCAGTAT TGGTGCGCAT CCTAGTTATC CTGATTTAGT TGGCTTTGGC CGTCGTACAA TGGCTTGTTC GTCAGAAGAA ATAATCGCGC TTATACATTA TCAAGTGGCA GCACTTGACG GTATGGCAAG TGCTCAAGGG CTATCGCTAG ATTATGTAAA ACCCCACGGT GCACTCTATA ACGACATGAT GAGAGAGCCT AAAGTGTTTG AAGCTATTTT AACTGCGCTT GCTCAATATC CAAAAACACT TGCGTTGATG TTACAAGCAA CGGCAGATAT TGAGTCTTAT AGGGAGCAGG CAAATAAATT TGGTCTCGTT ATTTATAGTG AAGCATTTGC AGATCGTTGT TATGACGATG AAGGTCGATT ATTAGCACGT AGTCAATCGG GGGCAGTGTT AAATAAAGAA GCCATGCTTG CCCAAGTTAA ACAATTATCA CAGCAAGGCA CCGTGACCAC CATCTCAGGT AAAGTGCTCA AGCTTAGCGT AGATAGTTTA TGTGTTCATG GTGATAATAT TGCCGGTGTA CAGGCTATTC GTGAAATTAA AGAGCTGCTG AGCTAA
|
Protein sequence | MKLNCDLGES FGAWSMGLDN EVMPHIDQAN IACGFHAGDP LVMQNTLALA KQFQVSIGAH PSYPDLVGFG RRTMACSSEE IIALIHYQVA ALDGMASAQG LSLDYVKPHG ALYNDMMREP KVFEAILTAL AQYPKTLALM LQATADIESY REQANKFGLV IYSEAFADRC YDDEGRLLAR SQSGAVLNKE AMLAQVKQLS QQGTVTTISG KVLKLSVDSL CVHGDNIAGV QAIREIKELL S
|
| |