Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_1558 |
Symbol | cdsA |
ID | 3521508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 1601592 |
End bp | 1602455 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637284021 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_268300 |
Protein GI | 71281039 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.17407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAAAAC AACGAATTAT AACGGCTTTA ATATTAGCAC CAGCTGCAAT CTCAGCAATT TTCTATTTGC CCATTAACTA CTTTGCCGGG CTTCTAATGG CAATTATCGC CATAGGTTCA TGGGAGTGGG CCCGCTTTAT GGGTTTGGTC AATACCATTC AACGTTTAGG TTATGTCGTA ATCACTAGCG CTTTAATCGC TACTCTATGG TTTTTATTAC CAGTAGATGA AACTTGGTTA GTCATAACAG GTGTACAACA TGAAATAACG TCACTGTTGT GGTTAAGTGT TATTTGGTGG TTATTTGCTG CTTTATTAAT GTTTTCATAT CCTAAGTCGA GTGCTTTTTG GTCTAATAAT AAATTTATAA TTGCAATGTT TGGTTGGTTA ACCTTAGTAC CTACATGGCT TGCCTTTATG GTTTTACGTA CAAATAATTA TGTATTAGAT GAATTTCAAG GTGCGCAGTT ATTGATGTAC TTGTTTATGC TAGTGTGGAG TGCTGATGTA GGTGCCTACT TTGTCGGGAA ATCTTTAGGT AAACATAAAC TAATGCCCAA TGTTAGTCCT GGAAAAACCA TTGAAGGATT TCTGGGTGGT GTCGTTTGTG CAGCTATCTT AACTGGGATC GTGGGGGTTT CATTACAATG GTCAAATGAT AAGTTTATAA CGGCTTTGTT AGTTACCTTA TTGATCACCT CAATTTCTGT GTTAGGTGAT TTAACGGAGA GTATGTTTAA ACGTCAAGCG GGTGTTAAAG ATAGTGGTTC TATCTTACCC GGTCATGGCG GTATTTTAGA TAGAATAGAT AGTCTAACGG CAACTGCACC TGTTTTTGCT CTTTGTTACC TATTACTTGC TTGA
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Protein sequence | MLKQRIITAL ILAPAAISAI FYLPINYFAG LLMAIIAIGS WEWARFMGLV NTIQRLGYVV ITSALIATLW FLLPVDETWL VITGVQHEIT SLLWLSVIWW LFAALLMFSY PKSSAFWSNN KFIIAMFGWL TLVPTWLAFM VLRTNNYVLD EFQGAQLLMY LFMLVWSADV GAYFVGKSLG KHKLMPNVSP GKTIEGFLGG VVCAAILTGI VGVSLQWSND KFITALLVTL LITSISVLGD LTESMFKRQA GVKDSGSILP GHGGILDRID SLTATAPVFA LCYLLLA
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