| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_0977 |
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| Symbol | |
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| ID | 3518476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 982802 |
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| End bp | 985075 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637283442 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_267726 |
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| Protein GI | 71278726 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATA AATTTAAATT ATCATCATTA GCACTGTCTA TAGCACTAAG TTGCCATGCT
AGTAATAGCT GGGCTGAGGA ACAACCTTCT GCAAGTAGTG ACAACGTTGA AAAAATAGTT
GTAACGGGTA CTTTCAGCGG TAAAAGTGTT GCTAAGGAAG AAGCAAGTTT TGCTGTTAGT
TCATTTTCTG AAGACGACAT AAAAAAATTA GCACCTAAAA GTACTGCTGA TTTATTTAAA
GCTATTCCAG GTGTTTGGGC TGAAAGCTCT AGTGGTGTTG CAGGCGCTAA TGTTTTCGTG
CGTGGTTTTC CTGGTGCTAG TGATGCTCCG TTTTTAACTG TTCAGTTAGA AGGTGCGCCA
ATTTTCCCAC CACCTACACT ATCGTTCCTA GAAAACTCAT CGATGTTCCG TTTAGATGAA
ACCGTTGAAT TTATGGAAGC GCTTCGTGGT GGTACTAATC CAGTAATATC TAACGGGCAA
CCAGGCCTAA CCACCAATTT TTTATTAAAA GAAGGCGCTG AAGATACTGA AGGTTTGGTA
AAATATTCTA CTTCTGATTA TGGTTTACAA CGTTTAGATG CAGTAGTAAG TGGTGAAATA
GCTGAAGACC TCTATATCAT GGTTGGTGGT TATATTAAAA GCTCACCCGG TGTTCGGGAT
GCTGGATTTA ATGCCGAAGA AGGTAATCAA TTTACCATCA ACATTACTAA AGAGTTAGAC
AACGGTAAAA TCAATTTCTA TACCCGTCAA ACTGATGATC ACGGGACTTG GTATTTACCT
ACACCTTTAG ACGTTGAAGG GGTTGATAAT GAATTCACCC AAATAGGTAC GCTAAATCGT
CAAGCCGAAA TTGCATATGG TCCAGATGGC ACCACTGAGA CTATTGATTT TGGCCAAGGT
CGTGGCTGGA ACGGTTCGGT ATCTGGGGGT AGTATTGACT TAGAGTTCAA TAATGGCTGG
GTACTAGTTG ATCGTTTTAG TTTCACTTCG GGTGATGCTG ATACTTACGG TTTAGTCCCA
AATGGTGCTG CAGTTAAATT ATCAACGGTA GCTGATAACG GCAGTACTGC TTTTGGTGCA
GTGACAGGCA CTGAATACTC TGGTGATACT GATGTTCAAC AAATTGGCCG TTGGGTAGTA
AAGAAAGAAA TTGAAGCATT CACCAATGAC TTTGCTTTAA CCAAAACCTT TGATAAAGGC
AGTGTAACCG CAGGTTTATA TAACTCAACC TTTTCATCTA AAGATTGGTG GTCAATAGGC
AATCAGTCTT ATCATGTTGT AGCACAGGGT GGCGAAAACC TTACCGGTAT AGATTGTAAT
GACAATGCAG ACAGTTGTGG CTGGAACTAC GACTTAAATG GTATTGGCGA AGGCAGAACC
ACTGCATTGT ATTTAGCTTC ATCCTACGAA ATATCAGATT CAGTCACAAT CGATGCAGGT
CTACGACGTG AAAACCATGA AATTGAATAT ACGGTTGATG AAGGTTTAGA TGGCGTGATC
ACTCAAGCAG TCTCTTATGA TGAGTCAAGC ACTGCTTGGA CCGCTGGTAT TAACTGGATG
TTCTCAGAGA AACAAGGGAT ATTTTTCCGT GCAAGTGAAG GCAGTAAAAT GCCATTCTTT
GATGACTTCA GAGAGAACTA CGCCTCTTAT CAAAATGGTG ACGATTTAAT TAAAGATGTT
GAACAATTTG AATTGGGTTA TAAACATTCA AGTGAGAACT TCGAACTTTA TGCCACAGGT
TTCTTCAATG AAGTTAACTC TACTTTCGCC GTAAGTCCTG AACAGGCAGC AGTAGCATTT
ACTAACGAAG CGTATGGCGT AGAGATTGAT TTTAATTACT TCACCGACAA TGGTTTCTCT
ATTAACTTAA ATGCGACCTT GCAAGAAACA GAAGTCACTG CACATGATGA TCCTGCGGTT
ATTGGTAAAG AAGCGCAAAG ATTACCTGGT TATCAAGTTC GCGTTACACC AAGTTATGAC
ATAGAATTTG AAAATGGTAT GTATGCAACC TTGTACGGCA CTCTTACAGC GGTAGATGAT
CGCTTCAGCG AGCAATATAA CGAGAAAGCA TTAATACTAG AAAGTTATCA AAAAATTGAC
CTTGGTGTAA TTTTCAATCT TACTGACGAA GTGAAAATGC AATTAGCAGT TAATAACCTG
ACAGACGAAG AAGGTTTAAC CGAAGGTGAC CCACGCGGTG TATCTGGTGT ATTGGACAAT
GGCCGTTATA TATTAGGTCG TACAATAGAT TTCAACGTGA GTTATAGTTT TTAA
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| Protein sequence | MPNKFKLSSL ALSIALSCHA SNSWAEEQPS ASSDNVEKIV VTGTFSGKSV AKEEASFAVS
SFSEDDIKKL APKSTADLFK AIPGVWAESS SGVAGANVFV RGFPGASDAP FLTVQLEGAP
IFPPPTLSFL ENSSMFRLDE TVEFMEALRG GTNPVISNGQ PGLTTNFLLK EGAEDTEGLV
KYSTSDYGLQ RLDAVVSGEI AEDLYIMVGG YIKSSPGVRD AGFNAEEGNQ FTINITKELD
NGKINFYTRQ TDDHGTWYLP TPLDVEGVDN EFTQIGTLNR QAEIAYGPDG TTETIDFGQG
RGWNGSVSGG SIDLEFNNGW VLVDRFSFTS GDADTYGLVP NGAAVKLSTV ADNGSTAFGA
VTGTEYSGDT DVQQIGRWVV KKEIEAFTND FALTKTFDKG SVTAGLYNST FSSKDWWSIG
NQSYHVVAQG GENLTGIDCN DNADSCGWNY DLNGIGEGRT TALYLASSYE ISDSVTIDAG
LRRENHEIEY TVDEGLDGVI TQAVSYDESS TAWTAGINWM FSEKQGIFFR ASEGSKMPFF
DDFRENYASY QNGDDLIKDV EQFELGYKHS SENFELYATG FFNEVNSTFA VSPEQAAVAF
TNEAYGVEID FNYFTDNGFS INLNATLQET EVTAHDDPAV IGKEAQRLPG YQVRVTPSYD
IEFENGMYAT LYGTLTAVDD RFSEQYNEKA LILESYQKID LGVIFNLTDE VKMQLAVNNL
TDEEGLTEGD PRGVSGVLDN GRYILGRTID FNVSYSF
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