Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_0074 |
Symbol | hemC |
ID | 3518906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 77468 |
End bp | 78421 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637282541 |
Product | porphobilinogen deaminase |
Protein accession | YP_266842 |
Protein GI | 71278494 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA CTACAGTACG AATTGCCACG CGTAAAAGCG CCCTCGCCTT ATGGCAAGCA GAATATGTTA AAGCGCAACT TGAGCATTTT CATGACGGTA TTAATGTTGA ATTAGTGCCT ATGACAACGA AAGGCGACAT CATTTTAGAC ACGCCTTTAG CCAAAGTCGG CGGTAAAGGT TTATTTGTTA AAGAGCTTGA AGTAGCAATG CTTGAAGACC GTGCTGATAT TGCTGTTCAT TCAATGAAAG ATGTTCCTGT CGATTTTCCA GAAGGCTTAG GATTAGAAGT CATTTGTCCT CGTGAAGATC CCCGTGATGC TTTTGTTTCT AATACCATCA AATCATTAAG TGATTTACCA CAAGGCTCTA TTGTTGGCAC CTCAAGCTTA CGCCGTCAGT GTCAATTAAA AGCAAGCCGC CCTGATTTAG ATATTCGTGA TTTACGTGGC AATGTAAATA CCCGCCTAAG AAAATTAGAT GAAGGTCAGT ACGACGCTAT TATATTAGCC GCTGCAGGCC TAATTCGCTT AGAAATGAGC GAGCGTATTG CACAGTTTAT CGAACCAGAA GAAATGCTTC CTGCAAATGG CCAAGGCGCT GTTGGCATTG AATGTCGTAA TGATGATGCG ACAATTAAAG CCTTATTAGC ACCATTAGAA TGTGCTACCA CCCGTATTCG TGTTCTTGCA GAACGTGCAA TGAATAGAGC ATTACAAGGC GGTTGCCAGG TTCCTATCGG TAGCTATGGT GTTATTTCTG CTGATGGTAA AAATATCCAC TTACGTGGCT TAGTTGGCTC TGTCGATGGT AGTGAAATGA TAGAAAGTGA AATCACCGGC CCTGTTGAAG AAGGTGAAGC GCTCGGCAAT AAACTCGCGC AAGAGTTACT AAGCCGAGGT GCAGATAAAA TTTTACAGCA AGTTTATTCA GAAAATGATA TCAAAAACAG CTAA
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Protein sequence | MNNTTVRIAT RKSALALWQA EYVKAQLEHF HDGINVELVP MTTKGDIILD TPLAKVGGKG LFVKELEVAM LEDRADIAVH SMKDVPVDFP EGLGLEVICP REDPRDAFVS NTIKSLSDLP QGSIVGTSSL RRQCQLKASR PDLDIRDLRG NVNTRLRKLD EGQYDAIILA AAGLIRLEMS ERIAQFIEPE EMLPANGQGA VGIECRNDDA TIKALLAPLE CATTRIRVLA ERAMNRALQG GCQVPIGSYG VISADGKNIH LRGLVGSVDG SEMIESEITG PVEEGEALGN KLAQELLSRG ADKILQQVYS ENDIKNS
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