| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01777 |
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| Symbol | RSp0672 |
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| ID | 1222979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 855222 |
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| End bp | 858167 |
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| Gene Length | 2946 bp |
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| Protein Length | 981 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240532 |
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| Product | GALA protein |
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| Protein accession | NP_522233 |
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| Protein GI | 17548893 |
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| COG category | [A] RNA processing and modification
[T] Signal transduction mechanisms |
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| COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.254341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCTGG GGCCCGCCGC GACGAGCCCG TCTTCCGGGC CGCGCATCCT GCCGCCCGCC
GCGCACGGTG ACCCGCGAAC CGCCGCCCTG CCGCGCGCAA CGCACCTGCA AATTCACGAC
CGAAGGGCGC TCAGCGGACT GCGCGACCAT CCCCACCTGG AAAGTGTCCA TCTCAAGGGC
GACTTCACGC TGGCGGACTT GAAGGCGCTT CCCACGACGC TGCGGCACCT GGACTTGAGC
GAGTGCACCG GCAGCGCCAA ATCGTTCCGG GCGATCGCGT ATCTCGCCGG CTTGCCGCTG
GAGTCGCTCA ATGTGGCGGG CGCCGAGATT GGCGACGGCG GCGCGCGATT GCTGGCGGCC
AACCCGTCGC TCAAGTCGCT CAACGCGGCG AGCGGCGGGA TCAGTGCCAG CGGTGCCCGG
ATGCTGGCCG AAAGCCCGAC ACTCGAGTCG CTCGACCTGA CCCAGAACGC GATCGGCGAC
GCGGGTGCGC AGGCGCTGGC GGGCAGCCGG TCGCTGCGGC ATCTCGCCGT GCGCAATGGC
CTCGTGACGG ACCTCGGCAC ACGGGCGCTG GCGCTCAACC CTGCGCTGGT CTCGCTCGAC
CTGGGCAACC TCGTCACCGA AACGGGAAAC CAGGTGGAGC AAGACGGTTA CGACAAGACC
GCCAACAACA TCACCGCGCA AGGGGCCTGG GCGCTGGCGC AAAACCGTTC GCTGAAGTCG
CTCAGCGTAC AGGGCAACGA CTTGTGCGGA GACGACGGCG TCCGGGCGCT GGCAAGAAAC
CGCACGCTGA CTTCGCTGAA CGTGGCCTTT ACCAACATGA CCTCGGCGAG TGCGAAGGCG
TTGGCCGACA ACCCGGTGCT CACCTCGCTC AGCGTGCGCT GGAACTACGG CCTGGACGAC
GCAGGGGCGA TGGAACTGGC CATGAGCCGA TCGCTCACCT CGCTCGACGC GCGCGACACC
GGCATGAGTG CGCGCGGGGC CCTGGCGCTG GCGGCCAATG CGCGGATCAG CGTCTGGCAT
GACCACGCCA ACCCGGTTCG GGCGCCGCTT GGCGAGCCTC CGCTATCGGG GCTGGCGGGC
GATCCCGGCC AGGCATCGCG AACCGCGCCC GGCGGCGCGA TCTGGTCGTC CGCCGCGCAG
GCGCGCCACG TTTCAGCCGA GGCCCCGGCA AACAGCGCGA TGACGGCTTC GACCCGGGAG
GGCTTCGCAC TGATCGACCC GTTCTTCAAC CGGGTGGCGC GGGAGTCTGG GCTGAACGTT
CAGGCGCCGC AGGAGATGCC GTGGACGCGG CTCCGACCAT CCGCCTCGGA AGCGAACCAC
GGCAATGCCG GCGCGCACGG CGCTTCAGCC GAGGGCCTGG CAAGCAGCCG GATGGCGGCG
TCGATCCGGG AGGGCCTCGG GCTCATCGAC CAGTATGTCG ACCGGATGGG GCGGGAGTAC
GGGCTGCCGG TTCGGGCGCC AGCCGCGCAG CCCGACAGCG CGGCGCCGGA GGCAACACAG
CCGACGCTGC CGGCTGACGT GTGGCAGACC ATTGCCGCCC AGGCAGACCC GCGCGTGCGC
CGGACCCTGT CGACGGTCAG CAAGCCGCTG CGGGCTGCCG CACTGGCCGC CACGAAGCAC
CTGACCGTCT GGGACAAGGC GGCATTCAGC CGCCTGCGAA ACTACCCCGC GCTGGAAAGC
CTGAGCTTTC ACGGCCCGCT CAGCCTCGCG GACCTGCGCG CGCTACCGCC GTCGGTGCGG
CACCTGGACC TGAGCGGATG CACCGGCTCC GCGGTCTCGG AGGCGGGCCT GGCTTATCTT
GCCCGGCTGC CGCTCGCATC GCTCGATCTG AGCGATACCG GCATCGGCAA TCGGGGCGCG
CAAGCGCTGG CCGCAAGCGC GTCGCTCACC TCGCTGAACC TGAGCGGCAA CGGGATCGGC
ACTGCGGGTG CCGAGGCATT GGGGCGCAAT ACCGTGCTGA CCGCGCTCGA CATCAGCGCC
AATCCGATCC GCAATGCAGG CGCGCAGGCA TTGGCGGGCA GCCGGTCGCT GACTTCGCTC
GAACTGCGCG ACACCGGGAT TGAGGATGGC GGCATCGAAG CGCTGGCCGC CAATACCGTG
CTGAGATCGC TCGACATCAG CGGCAACGAC CTCAGCGACC AATCTGCTGC TGCGCTTGCC
GCAAACCGAA CGCTAACCTC GCTCAAGGCG AACGGCTGCG GCCTGACCAA TGACATGGCG
CAGCAGCTCG CGCGCATCCG CTCCCTGCGC ACGCTCGAAG TGGGCTCGAA TTCAATTGGC
GATGCGGGGG TGCTGACGAT CGCGCGCAAC GCTTCGCTCC GATCGCTCAA CCTGAGCCGC
AATCCGATCA CCCCGCAAGG CTTGTACCCC TTGGCGCTGA GCCGCACGCT CAAGTCGCTC
GATGTGAGCC GCATCGGGTG CGGCGATCGG GGCGCGCTCC TGCTGTCGGG AAACCGCGCG
CTGACCTCGC TCAAACTGGG GTTCAACCGT GTCAGCAGCG AAGGCGCGCG GAGGCTGGCG
GCAAACCGCA CGCTCGTCTC GCTGGACCTG CGCGGCAACA CCATCGACGT CGCCGCCGCC
AGGGCGCTGG CGAACGCCGA GCCCCTGGCT TCGCTCAACG TGAGCGATTG CAGGCTCGAC
GACGCAGTCG CGTGCGCGCT GGCGGAAAGC CGCACGCTGA CCTCGCTCGA CGTCAGCTGG
AACCGGCTAT CGCACCGGGC GGCCCGGGCA TTGGCGAACA ATCCCGTGCT GGCTTCGCTC
TATATCAGCC ATAACGACAT CGGCCCCGAA GGCGCGCAGG CACTGGCCGA CAGCGCCTCG
CTGACCTTTC TCGACGCGCG CGCGAACCGC ATCGGCGAGG CGGGCGCGCG GCTGCTGGAG
GCCAACACCA GGATGCGTGG CACGCCGCAG AATCCGCACT TCCTGGCGCA AGACGTTCCG
GAGTAG
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| Protein sequence | MRLGPAATSP SSGPRILPPA AHGDPRTAAL PRATHLQIHD RRALSGLRDH PHLESVHLKG
DFTLADLKAL PTTLRHLDLS ECTGSAKSFR AIAYLAGLPL ESLNVAGAEI GDGGARLLAA
NPSLKSLNAA SGGISASGAR MLAESPTLES LDLTQNAIGD AGAQALAGSR SLRHLAVRNG
LVTDLGTRAL ALNPALVSLD LGNLVTETGN QVEQDGYDKT ANNITAQGAW ALAQNRSLKS
LSVQGNDLCG DDGVRALARN RTLTSLNVAF TNMTSASAKA LADNPVLTSL SVRWNYGLDD
AGAMELAMSR SLTSLDARDT GMSARGALAL AANARISVWH DHANPVRAPL GEPPLSGLAG
DPGQASRTAP GGAIWSSAAQ ARHVSAEAPA NSAMTASTRE GFALIDPFFN RVARESGLNV
QAPQEMPWTR LRPSASEANH GNAGAHGASA EGLASSRMAA SIREGLGLID QYVDRMGREY
GLPVRAPAAQ PDSAAPEATQ PTLPADVWQT IAAQADPRVR RTLSTVSKPL RAAALAATKH
LTVWDKAAFS RLRNYPALES LSFHGPLSLA DLRALPPSVR HLDLSGCTGS AVSEAGLAYL
ARLPLASLDL SDTGIGNRGA QALAASASLT SLNLSGNGIG TAGAEALGRN TVLTALDISA
NPIRNAGAQA LAGSRSLTSL ELRDTGIEDG GIEALAANTV LRSLDISGND LSDQSAAALA
ANRTLTSLKA NGCGLTNDMA QQLARIRSLR TLEVGSNSIG DAGVLTIARN ASLRSLNLSR
NPITPQGLYP LALSRTLKSL DVSRIGCGDR GALLLSGNRA LTSLKLGFNR VSSEGARRLA
ANRTLVSLDL RGNTIDVAAA RALANAEPLA SLNVSDCRLD DAVACALAES RTLTSLDVSW
NRLSHRAARA LANNPVLASL YISHNDIGPE GAQALADSAS LTFLDARANR IGEAGARLLE
ANTRMRGTPQ NPHFLAQDVP E
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