Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00391 |
Symbol | RSp0512 |
ID | 1222819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 636821 |
End bp | 638557 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637240372 |
Product | hypothetical protein |
Protein accession | NP_522073 |
Protein GI | 17548733 |
COG category | [S] Function unknown |
COG ID | [COG5298] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0724219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACAT TTCTGCGCAA GTTCGCCGTG GCGCTGACGC TGGGGGCGAG CCTGTTCTGC GCCTCGCTGT CGCTGAGCAT GACCGGCCGA GCCCCGACCC AGGCCTGCAC CCTGCAGCTC GGGCCGATCT GCGCGTCGGT GGACGTGGGC TCGCCGGCCC GGGCCCAGAC CACCACGGCC AATGTCCTGG TCATGTACGA CGCGCCGCCG AACGACCAGT ACACCAACCT GGGCTTCGCG TACGCGATCA TGCTGTACAA CCTGCTCGGC CACTTCAACA CCCAGGTCAC CCTGCTGCCG GTGCAGAACT ACACCGCCGG CATGACCGAG TCGTACGCGG CCACGTTCTA CTTGGGGAGC TACTACAACA ACCCGATTCC CGCCGCGTTC CTGAGCGATG TGTCCACCAC GCAGAAGACC ATCGTATGGT TCAAGTACAA CCTGTGGGAG CTGGCCTGGA ACACAGCCTA TCCGTTCACC TCGCGCTACG GCATCAGCTT CGCCGGCCTG CGCGGCATGA ACGTGGCGCC GTCGTCGAGC AACCCCAACC CGGGCTTCTT CGACACGGTG ACCTACAAGA ACCTGTCGAT GACGAAGTAC TACGCCTTCA ATGCCGCCAC CGGCCTCATC AGCGCCGACC CGGACATTGG CGTGACCTCG GTGACGGACG CGACCAAGGC CGGCAGCCTG GTGACCATCA CCAATGCGAC CACGCAGGAA ACCGCGCCGT ACGTGATCCG TTCGGGCAAC TTCTGGTACT TCGCCGACAT GCCGTTCTCG TATATCGGGC CGCGCGACCG CTACCTCGTC GTCTGCGACA TGCTGCACGA CATCCTGGGC ACCAATGCCC CCACGCTGCA CCGCGCGATG ATCCGCCTGG AGGACGTGGA TGCGACGGTC TCGGTGTCGA CCATGAAGAC GCTGACGGAC TGGATGTACA ACAAGAAGAT CCCGTTCTCG GTTGCCGCCA TTCCGCTCTA CAAGGACCCG AACGGCGTCT ACAACGGCGG GGTGTCGCAG ACCATCCACC TGGTCAACGC CACCGGGCTC AAGCAGTCGC TCAACTACGC CAAGGTGCGC GGCGGCAAGG TGCTGATGCA TGGCTACACG CACCAGTACA GCAACATCCC GAACCTCATC AACGCCGTCA GCGCCAATGA CTTCGAGTTC TGGCTCGCCA CGCAGAACCG TCCGGTGAAC GAGGATTCGA CCCAGTGGGC GGCGCAGCGG CTGTCGTCGG GCCTGCTCGA ATTCCAGCTC AACGGGTATC AGCCGTTTGC GTTCGAGGCG CCGCACTACC AGTCGTCGCC GCTGTCGATG AAGGCCGTGC CGCGGTATTT CAAATCGGTG TACCAGCGGG TGGTGTACTA CACGTCCGAC AACCCGCAGA CGCTGACCTC GACGGCGCCC GGCCACGATT TCTCGGTCGG CCAGTTCTAC CCGTACATCA TCAAGAAGGA CTACTACGGG CAGCGGGTCA TCCCCGAGAA CCTGGGCAAC ATCGAGTACA ACATCTGCAA CATCGATCCG TCTTCGTGCC TGACCTACAC CGCGCAGGAC ATCCTGGCCA ACGCGCAGTA CGCCGTGGTC GTGCGGGACG GCTTCGCCTC GTGGTTCTTC CACCCGTTCT GGCTGGAGCC TGACCTGAAC GAGCCGGGCT TCGCCGACTT CCAGTCCGTC ATGAACGGCA TCTCGGCGCT GGGGTTCTCC TGGGTGGATG CCGCCACGGT GCAATAG
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Protein sequence | MKTFLRKFAV ALTLGASLFC ASLSLSMTGR APTQACTLQL GPICASVDVG SPARAQTTTA NVLVMYDAPP NDQYTNLGFA YAIMLYNLLG HFNTQVTLLP VQNYTAGMTE SYAATFYLGS YYNNPIPAAF LSDVSTTQKT IVWFKYNLWE LAWNTAYPFT SRYGISFAGL RGMNVAPSSS NPNPGFFDTV TYKNLSMTKY YAFNAATGLI SADPDIGVTS VTDATKAGSL VTITNATTQE TAPYVIRSGN FWYFADMPFS YIGPRDRYLV VCDMLHDILG TNAPTLHRAM IRLEDVDATV SVSTMKTLTD WMYNKKIPFS VAAIPLYKDP NGVYNGGVSQ TIHLVNATGL KQSLNYAKVR GGKVLMHGYT HQYSNIPNLI NAVSANDFEF WLATQNRPVN EDSTQWAAQR LSSGLLEFQL NGYQPFAFEA PHYQSSPLSM KAVPRYFKSV YQRVVYYTSD NPQTLTSTAP GHDFSVGQFY PYIIKKDYYG QRVIPENLGN IEYNICNIDP SSCLTYTAQD ILANAQYAVV VRDGFASWFF HPFWLEPDLN EPGFADFQSV MNGISALGFS WVDAATVQ
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