| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00388 |
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| Symbol | RSp0509 |
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| ID | 1222816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 633246 |
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| End bp | 635003 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637240369 |
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| Product | putative signal peptide protein |
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| Protein accession | NP_522070 |
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| Protein GI | 17548730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.052584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG CTCGACACAC CCTCCGCCCC TTGCCGGCGC GGCTGCGCTG GCCGATCGCG
ATGGCGGTCT GGGCGCTTTG CCACGGCGCG CTGGCCGAGC CGGCGGCGAT GCAGCCGCTG
TCGCCCGATG CCTATCGCCA TGCCGATCGC GCTTACCAGT CCATCGCCGC CAACCAGCTT
GATGCGGCCG AGCAGGCGGC GCGCGCGGCG CTGGGGGTGC AGCCCGACAG CCTCCAGCTC
AACCTGCTGC TGCTCGATGT GCTGACCCGC AAAGGCCAGC TGGAGGCAGC GCGCGCCCAG
GCCGACGCCG TGCTGGCGCG CTTTCCGGAC CAGCCACGGG TCTACGCGCA GCACGGCTTC
CTGGCGCAGC GCGCCCAGCA GCCCGAGGTG GCGGAGCAGG ATTTTGCCCG GGCGCTGGAG
GGCACGGACT GGACCCCGCA GGAACAGCGC AACCTGCGCC TGGCGTGGTC GGACAGCGCC
TATGCCGCCA AGCATCCCGA CGCCGCGCTG CAGGCTCTCG CGCCGCTGCA GGATCAGCCC
GACCCCGACA TCCAGATCCG GCTCGCGCAG GCACGCCTGC AGGCCGGTGA CCGCGAGGGC
GCGGCGCACG CGGCCGCGCT GGCCGGCGCC CAGTCGGATG ATCCGGTGCG CCAGGGCTAT
GCCCGGGCAC TGTTCGCCCA GGCCACGAAT GCCGGGGCAG CGCAGGATGC CGCCGCGCTG
CCCGCCAACG ATCCGCGCGT GATCGGCCAG CGCGCGCTCA ACGAAGCGTA CGGCCATCTG
CGTGCGCACG ACGATCGCGC CGCGCTCGAT GCCTTCCAGC GCGGCTTCGC CACCGGCGAG
GGCAACTGGA CCCACTACGC CGATGCCGCC TACGCCGCCA AGCGCCTGGG CGACAACCCC
ACGGCCATCT CGCTGTTCCG CGCCAGCCTC GACCACGCGG ACGCGGACCG TGCCGACGAC
GGAGCCGGCG GTGGCGATCC GACCGGCAGC CAGCCGCTTC CGCCCGACCG GCGCTTCGGT
TACCGGCGCG AGGTGGAGCA GATGCAGCGC ACCTGGGGCG CCGTGCTGTC GTCCGCCTAC
CAGGCATCGG CGTTCGGTCT GCCCTCCAAC CGCAGCATCC TGCAAGGCGG CGCGGAAGTG
TATTGGCAGC CCCCCGGCAT CGGCTACCAG GATGGCCGCA TCCTGCAGGT CTTCGTGCGC
GGGTACGACA ACCTGCACGA CGGCTCCGGC GCGCCGACCG GCATGCCGAC CGCGCAGGGC
TCCGTCGGCG CGCGCTACAA GCCCATCAAG GACGCCAATC TGGTCTTCAC CGCGGAGCGG
CTGGTCAAGA TCGGCAACCA GTCCGTCAAC GACACGCTGC TGCGCATCGG CTACTCCAGC
GACGAGGGCA TCGACCTGCA GGTCACCAAG CCGCGCTGGC AGACCTGGCA AGTGTTTGCC
GAGGGTGCGT ACTTCGTCAA CGCCGGCCGC CTCATCGTGA GCGGCGAGGC GCGCTACGGC
CATACCTGGC GCGTCGATTC CATCAGCGAC CGGCTGACCG TGTATCCGCA CATCGTGCTG
GCGGGCGATC ACGACAACAA GGCCGATCGG CAACTGGCGG CGGGCATCGG GCCGGGCGTG
AACTTTCGCT ACTGGTTCCG CGAATCGAAG TACGCCGCGC CGGCGAGCTG GCTCGACCTG
ACGGTGCAGT TCCGCATGGC GCTCACGCAT GCGGACCGCG CCAAGGGCGT GGTGGCGCGC
GCCATCCTGT GGTTCTGA
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| Protein sequence | MNAARHTLRP LPARLRWPIA MAVWALCHGA LAEPAAMQPL SPDAYRHADR AYQSIAANQL
DAAEQAARAA LGVQPDSLQL NLLLLDVLTR KGQLEAARAQ ADAVLARFPD QPRVYAQHGF
LAQRAQQPEV AEQDFARALE GTDWTPQEQR NLRLAWSDSA YAAKHPDAAL QALAPLQDQP
DPDIQIRLAQ ARLQAGDREG AAHAAALAGA QSDDPVRQGY ARALFAQATN AGAAQDAAAL
PANDPRVIGQ RALNEAYGHL RAHDDRAALD AFQRGFATGE GNWTHYADAA YAAKRLGDNP
TAISLFRASL DHADADRADD GAGGGDPTGS QPLPPDRRFG YRREVEQMQR TWGAVLSSAY
QASAFGLPSN RSILQGGAEV YWQPPGIGYQ DGRILQVFVR GYDNLHDGSG APTGMPTAQG
SVGARYKPIK DANLVFTAER LVKIGNQSVN DTLLRIGYSS DEGIDLQVTK PRWQTWQVFA
EGAYFVNAGR LIVSGEARYG HTWRVDSISD RLTVYPHIVL AGDHDNKADR QLAAGIGPGV
NFRYWFRESK YAAPASWLDL TVQFRMALTH ADRAKGVVAR AILWF
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