Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00376 |
Symbol | RSp0498 |
ID | 1222805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 621010 |
End bp | 621891 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637240358 |
Product | hypothetical protein |
Protein accession | NP_522059 |
Protein GI | 17548719 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.985484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGTG GCATAGGACG CTTCGGATCG AAGCCAGGCG ATACGAAATC AATCAAGCTG CAAGCCCCTT TGGATCGCAT CGTGGCATCG GGCATCGCGG ATCTCAGAGT CAGCCACTAC TACTTCGACG AGCCGTTATT CGACGAGTAT GAATTGACGA CAGTCCGTGC GACATGGGAT TTTTCCGCCG CGGAATCCAT TGTCCGGGAT GGGCACAATA TTCTCGATCT GGGCTGCGGC GATGGTCGGC TGCTACTGCA CCTCGCCGAG AAATTTTCGC TGAAGGAAAG CTTTGGCATC GACATCTCCC CCGTCGCCAT CGATCGCTTC AATGCCTCCA TCCATCACAG CCACGTTCAC GCGCTCCAGG GCGACATATT TGATCTGCCG GCACCGATCA CACAACGACG CTTCGACGTC GTCACGTTTG GCGATGCGAC CGTCAATTTC ATTCTGGACG ACGATAGGCT CGAAGTGCTG TTGCGTAGCG CGAAGGCGCA ACTGCGCGAC GCCGGATCGA GGATCATGGT CGCCGTCTTC GGTGACGGAA CACCCGAGCG TCTTTCGTTC ATGGACAAAC GATGCACGGT GGTGCCATTT CGGCGGAGCA ACGGGGAAGC CGCGCTCATC TGGTGGGCCT ACAAATACGA CAGCGACAAG CTGATCATGC ATCGATCGGT CTTTGCGCAA TCGGGACGGA ATGAAAACGG GAATATCGAA GGAGTCGTAT GCGATCTTCA AGACCGGATG TGGACGCCGT CGGCACTCGT CCCCATCGCG GAGGCCAGCG GCCTCACGGT CGACAAAGTG ATCGCATCCG AAGTGCAAGA CGGGACCGCC GTGGGCATGG CGACGGCAAT CGTCATATTG AAATCGGCTT GA
|
Protein sequence | MMSGIGRFGS KPGDTKSIKL QAPLDRIVAS GIADLRVSHY YFDEPLFDEY ELTTVRATWD FSAAESIVRD GHNILDLGCG DGRLLLHLAE KFSLKESFGI DISPVAIDRF NASIHHSHVH ALQGDIFDLP APITQRRFDV VTFGDATVNF ILDDDRLEVL LRSAKAQLRD AGSRIMVAVF GDGTPERLSF MDKRCTVVPF RRSNGEAALI WWAYKYDSDK LIMHRSVFAQ SGRNENGNIE GVVCDLQDRM WTPSALVPIA EASGLTVDKV IASEVQDGTA VGMATAIVIL KSA
|
| |