Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2243 |
Symbol | |
ID | 1221088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 2436274 |
End bp | 2437254 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238642 |
Product | transcription regulator protein |
Protein accession | NP_520364 |
Protein GI | 17546962 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.145641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCG CGCTGCCCGC GTTCGATCTG AACCTGCTGC CGATCCTGCT GGCGCTGCAC GATGCGCGCA GCGTCAGCAT GGCGGCGCAG CAGCTCGGCA TGAGCCAGCC GGGCGTGAGC ACGGCGCTGG CCAAGCTGCG CACGGCGTTC GGCGATCCGC TGTTCGTGCG CACCTCGCGC GGCATGGAGC CGACGCCACG CGCGCTGGCG CTGATTCCGG CGGCGCGCGA TGTGCTGGCG CGCATCCAGC AGGGCATCGT GGAGACCGGC GCGTTCGATC CGGCCACCAC CACGCACCTG TTCTCGATCG CGCTGTCGGA CGTGGGCGAG ATGGTGTTCC TGCCGCGCAT CGTCGAGGCG ATGGCGCGGC AGGCGCCGCA TGCCTCGGTG CAATCGGTGA CGTTGCCGCC GGCGCAGATC GAGCGTGCCC TGGAGACCGG CGCGCTCGAC CTGGCGGTCG GCTACTTCCC CGATCTGAAG AAGAACAACT TTTTCCAGCA GCGGCTGTTC ACCCATTACT TCACCTGCAT CGTGCGGGCC GACCACCCGG TCACGCGCGG CGGCAACACC CGGCTGTCGA TGCAGCAGTT CCTGGAATAC GGCCACGCCG TCGTGCGGGC CGAGGGCCGC AGCCAGGAGC TGTACGAGCG CTTCCTGGAG CGCAAGCGCA TCCGCCGCAA GCCCGCGCTG CTGACGCCGC ATTTCATGAG CATTCCCTTC ATCCTGGCGC GCACCGACCT GATCGCGACG GTGCCGCATG CGGTGGGGCT GTCGTTCATG CAGTCGCACG CCAACATCCG CGTGATGGAG CCCCCGCTCG CGCTGCCCAG CTTCGACCTC AAGCAGCACT GGCACCGCAA GTTCCACAAC GATGCGCGCA GCCAGTGGCT GCGCGCGCTG GTGTCGTCGC TGTTCAACGA TGAGGCGGAC GAGTGGCGCG AGCCCGGTCA TCAGCCGGCG CGGCGCAGGC AGACGCAATA A
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Protein sequence | MTAALPAFDL NLLPILLALH DARSVSMAAQ QLGMSQPGVS TALAKLRTAF GDPLFVRTSR GMEPTPRALA LIPAARDVLA RIQQGIVETG AFDPATTTHL FSIALSDVGE MVFLPRIVEA MARQAPHASV QSVTLPPAQI ERALETGALD LAVGYFPDLK KNNFFQQRLF THYFTCIVRA DHPVTRGGNT RLSMQQFLEY GHAVVRAEGR SQELYERFLE RKRIRRKPAL LTPHFMSIPF ILARTDLIAT VPHAVGLSFM QSHANIRVME PPLALPSFDL KQHWHRKFHN DARSQWLRAL VSSLFNDEAD EWREPGHQPA RRRQTQ
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