| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2069 |
|---|
| Symbol | rpsO |
|---|
| ID | 1220910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 2242145 |
|---|
| End bp | 2242414 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637238464 |
|---|
| Product | 30S ribosomal protein S15 |
|---|
| Protein accession | NP_520190 |
|---|
| Protein GI | 17546788 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0184] Ribosomal protein S15P/S13E |
|---|
| TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.614484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTCG CTGACATCAA CAAGCAAGAA GTCGTCAAGC AATTCGCCCG TGGCACCAAC
GATACGGGCA GCCCCGAAGT GCAGGTCGCA CTGCTGACCG CTCGCATCAA CGAGCTGACC
CCGCACTTCA AGGCGCACAT GAAGGATCAC CACAGCCGCC GCGGTCTGCT CAAGATGGTG
AGCCGCCGTC GCCGTCTGCT CGACTACCTC AAGAAGAACG ATGCCGACCG CTACCGTTCG
CTGATCGAGA AGCTGGGTCT GCGTAAGTAA
|
|---|
| Protein sequence | MSVADINKQE VVKQFARGTN DTGSPEVQVA LLTARINELT PHFKAHMKDH HSRRGLLKMV
SRRRRLLDYL KKNDADRYRS LIEKLGLRK
|
|---|
| |