| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1714 |
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| Symbol | hupB1 |
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| ID | 1220550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1833103 |
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| End bp | 1833375 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637238104 |
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| Product | DNA-binding protein HU-beta |
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| Protein accession | NP_519835 |
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| Protein GI | 17546433 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.606946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0324854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGA CAGACCTCAT CGACCATGTG GCAGCGCAGA CCGACATGTC GAAAGCGGCA
GCCGGGCGCG CCATCGATGC GCTGATCGGC GGGATCAAGG ATGCGCTGTG CGACGGCGGG
TCGGTGACCT TGGTGGGGTT CGGAACGTTC CTGGTTGGCC AGCGTTCGGC GCGTGCCGGG
CGCAATCCGC GCACCGGTGC GACCATCAAA ATCGAGGGCG CCAAGGTTGC GAAATTCAAA
CCTGGCAAAG CGCTCAAAGA TGCGCTAAAC TAG
|
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| Protein sequence | MNKTDLIDHV AAQTDMSKAA AGRAIDALIG GIKDALCDGG SVTLVGFGTF LVGQRSARAG
RNPRTGATIK IEGAKVAKFK PGKALKDALN
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