Gene RSc1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1515 
SymbolgloB 
ID1220344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1616227 
End bp1617081 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content69% 
IMG OID637237898 
Productputative hydroxyacylglutathione hydrolase protein 
Protein accessionNP_519636 
Protein GI17546234 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGAT CGGAAGAGGA GTCGGGCATG GTCCAGGGTG GTGTGCCGCT TGCCGTGGAG 
GCGATCGCTG CGTTTACCGA CAATTATATT TGGGCACTTC ACGATGGCCG CGTGGCCGCC
GTGGTCGATC CCGGCGACGC GCAACCGGTG CTCCGCTTCC TGCAGGCGCG CGGTCTGGCA
CTCGGTGCCA TTGTAATCAC ACATCATCAC GGCGATCACG TCGGCGGCGT GCAGGCGCTG
GTCGAGGCCT ATCCGCGCGA CCCGTCCGGC GCGCCGTTGC CGGTGATCGG CCCGGCGGAC
GAGTCGATTC CCTGCCGCAC GCAGGCTGTG CGCGAGGGCG ACACCGTGAC CCTCTCGCAT
CCCGCCGCCA CCTTCCACGT GCTCGATGTG CCCGGCCATA CGCGTGGCCA TGTCGCCTAT
GTCGGCCGCC TGCAGGGGCC GGATGCGCCC GCCAGCCTGT TCTGCGGCGA TACGCTGTTC
GCCACCGGCT GCGGCCGCCT GTTCGAGGGC ACGCCCGCGC AGATGCGGCT GTCGCTGTCC
AAGCTGGCCG CGCTGCCGCC CGACACGCGC GTGTACTGCG CACACGAATA CACCGCCGCG
AATGTGCGTT TCGCGCGCGC GGTCGAACCG GGCAACGCCG CGCTGGCGGC ATGGGAAGAC
GAAGTCGCCT CGCTGCGCAC CGACGGGCGC GCGACCGTGC CGACCACGGT CGGCCACGAG
CGCGCGACCA ATCCCTTCAT GCGATCGAAC GAGCCCGCCG TGGCGGCCTC GGTGGCGCAG
CATGCCGGTA TCGGAGTCGA CGATCCGGTG GCCGTTTTCG CGGCGCTGCG CGAATGGAAA
AACGGATTTC GCTGA
 
Protein sequence
MRRSEEESGM VQGGVPLAVE AIAAFTDNYI WALHDGRVAA VVDPGDAQPV LRFLQARGLA 
LGAIVITHHH GDHVGGVQAL VEAYPRDPSG APLPVIGPAD ESIPCRTQAV REGDTVTLSH
PAATFHVLDV PGHTRGHVAY VGRLQGPDAP ASLFCGDTLF ATGCGRLFEG TPAQMRLSLS
KLAALPPDTR VYCAHEYTAA NVRFARAVEP GNAALAAWED EVASLRTDGR ATVPTTVGHE
RATNPFMRSN EPAVAASVAQ HAGIGVDDPV AVFAALREWK NGFR