Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0651 |
Symbol | |
ID | 1219456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 697878 |
End bp | 698855 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237010 |
Product | putative tight adherence TadB-related transmembrane protein |
Protein accession | NP_518772 |
Protein GI | 17545370 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.280791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC TGATGATCGG ATTCCTGCTC TCGGTCTTCG TCGCCATCGC GCTGGGCGTG CTCGGCGCCT ACCAGTGGTG GAGCACGCAC CGCAGCCAGA CCGCGCGGCG CCTCAGCCAC CGGCTAGAGA CCGCCCTGCT CAACAGCGCG AGCCACAACA AGGAAGCCAG CATCCTCAAG CAGCGCGTGC TGAGCGACTC GCCGGAGTTC GCCCGGCTGC TGCAGCGCCT GCCGCGCATC GACATGGTGG ACCGCTTCCT GCTGCAATCG GGGCTGGACT GGTCGGTGGG CCGCCTGCTC GGCCTGTCGC TGGCGTCGGC GGCGATCGTG GGCGGCCTGG TGTGGCTGCT GCACCCGCTG TGGGTGGCGC AGCTGTCCAT CACGCTGATG GGCGCGTCGC TGCCGCTGCT CTACGTGCTG CGCTGCCGCG CCAAACGCCT GCTCAGGCTT GAAGAGCAAC TGCCGGAGGC CGCCGACCTG CTCAGCCGCG CGCTGCGCGC GGGCCATTCG CTGCCCAGCG CGCTCGACAT GGCGGGCAGC GAACTGCCGG CCCCGATCGG CGCCGAGCTG GCGCTGGTCT TCAGCGAGAT CAACTACGGC GTGCCGATGA ACGACGCGCT CGCCGGCCTG ACCGATCGGG TGCCGATCGA AGACCTGCAC TACCTGGTCA TCGCCGTGCT GATCCAGCGC GAATCGGGCG GCAACCTGGC CGAGATCCTG GACAACGTCG GCTCGCTGAT CCGCAAGCGC CTGCAGCTGC TGGACAAGGT GCGCGTGCTG TCGGCCGAGG GCCGGATGGG CGGCTGGATC CTGACGCTGC TGCCGCCGGT GGTCGGGGTC ATCGTCTACG AGCTCAATCC CGACCTGATC TCGACGCTGT GGAAGGACCC CACCGGCCTG AAGATGCTCT GGTACGCCAT CACCATGACC TGCGTGGGCG TGATCTGGAT CCGCCAGATC GTGCGCATCC ACATCTGA
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Protein sequence | MNTLMIGFLL SVFVAIALGV LGAYQWWSTH RSQTARRLSH RLETALLNSA SHNKEASILK QRVLSDSPEF ARLLQRLPRI DMVDRFLLQS GLDWSVGRLL GLSLASAAIV GGLVWLLHPL WVAQLSITLM GASLPLLYVL RCRAKRLLRL EEQLPEAADL LSRALRAGHS LPSALDMAGS ELPAPIGAEL ALVFSEINYG VPMNDALAGL TDRVPIEDLH YLVIAVLIQR ESGGNLAEIL DNVGSLIRKR LQLLDKVRVL SAEGRMGGWI LTLLPPVVGV IVYELNPDLI STLWKDPTGL KMLWYAITMT CVGVIWIRQI VRIHI
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