| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0285 |
|---|
| Symbol | dsbA1 |
|---|
| ID | 1219088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | - |
|---|
| Start bp | 317588 |
|---|
| End bp | 318244 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637236642 |
|---|
| Product | thiol:disulfide interchange signal peptide protein |
|---|
| Protein accession | NP_518406 |
|---|
| Protein GI | 17545004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.840181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCGCTGCTTT CCTGATTGCC CTCGCTACCG GCGCCGGCTT CCTGATGACC
GCTCCCGCCC AGGCCGCCCC GACGGCCGGC AAGGAATATA AAGTGCTGCA AACGCCGCAG
CCCGTGGCGG CCGGCAAGAT CGAAGTGACG GAGTTCTTCT GGTACGGCTG CCCGCACTGC
TACGATTTCG AGAACACCTG GACGGCGTGG GTCGCCAAGC AGGGCAAGGA CGTGGTGATC
AAGCGCGTGC CGGTTGCCTT CAACGCCAAG CTGGAACCGC ATACCCGGAT CTACTACGCG
CTGGAAGCGC TGGGCAAGCT GGAGGCCAAG GACGCCAGCG GCCGCACCCT GCATGACCGC
GTGTTCGACC AACTGCACAA GAACTACCGC TCGATGTCGG AGCCCGATCA GATCGCCGAC
TTCATGGCGG CCAACGGCGT GGACCGCAAG GCCTTCCTGG ACGCCTACAA CTCGTTCGGC
GTGAACGCCA ATACCAAGCG CGCCGCGCAG TTGGCGGACC AGTACAAGAT CGAAGGCGTG
CCGACCGTCG TGGTGCAGGG CAAGTACACC ACCTCGCCGG CGGATGCGGG CAGCAACGTG
GGCGCCGCCC AGACGCTCGA CTACGTCGTC CAGCAGGTGC GCGACCACAA GATGTGA
|
|---|
| Protein sequence | MKKLAAFLIA LATGAGFLMT APAQAAPTAG KEYKVLQTPQ PVAAGKIEVT EFFWYGCPHC
YDFENTWTAW VAKQGKDVVI KRVPVAFNAK LEPHTRIYYA LEALGKLEAK DASGRTLHDR
VFDQLHKNYR SMSEPDQIAD FMAANGVDRK AFLDAYNSFG VNANTKRAAQ LADQYKIEGV
PTVVVQGKYT TSPADAGSNV GAAQTLDYVV QQVRDHKM
|
|---|
| |