Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | WD0068 |
Symbol | |
ID | 2738748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
Kingdom | Bacteria |
Replicon accession | NC_002978 |
Strand | + |
Start bp | 64715 |
End bp | 65938 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637172303 |
Product | outer membrane protein TolC, putative |
Protein accession | NP_965896 |
Protein GI | 42519981 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.896077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGAT TGATTATCAC ACTTGCGATC ATTTTTAATA CTATAAGTTG CTATGCAACC GATGTGGGAG AAGTGATAAG CAAAGCCATC AAAAATAGCT CAAAAATAAA GTCTCAATTT TACCAATATA AAAGCGCAGA AAAACACTAT AAATCTTCTG GGTTAGCTGG ATTTTTACCT GACATTAATT TGCAATACAA TTTCGATAGT AACTTTAATC TTGATACATC TGAAAAAAAA CTTACATTGC GCCAGAAATT AATCGATGGC GGTGGTACCT TTGCCACATT CAGTCGATCA AGCCATCTTC TCAAAGCAGA AAAGATGCGA TTTCAGCAAT TAAAACAAGA GCTTGCACTT AATGCTGTGA AAGCATATGT TAATGTTTTA CAAAAGACAG AAATATTAAA GCTCAGAGAA CATAAAGAAC GCGTTTCTTT GGAACATTTG TCAGCTATGA AAAAACGCTT TTCCCTTGGA GAGGTAACCA ATGCTGAAGT TTTGTTAGCA AAAGCAAAAT TTTCGTCTTC TATATCCGAA AGAGTTGATG CTGAAGGTAA ATTAAAGTTG GTAAATATTG CTTATTATCA TTTGATTGGC GAAGATGCTG ATGACCTTTC TGAAGCTAAT GATAAACTAC CTTCTGTTCC AGAGCTAAAT GAATGTTTAC AGTTAGCAAA AACCAATAAT TTATCTCTAA AAGCAGCAGT TTATCAAAAA AGAGCAGCCG GAATGGAAGT GATTGCTGAA AGCTCCAAGT GGCTTCCTTC TTTAAATCTA AGTGCAAGCA AAAATTTTGG GGAGGATGGT ATGAAGGTAG ACAAACTATT AGAAAATGTT CATGTAGTTT TTACTCTTGA TGTTCCAATC TTTAAGAGAG GAGTTAATGC TTTTGGTGTC AGTAAAGCTA AAATGGATGC AAAAAAATCT ACCTACGATT ATTATGAAAC GGTAAAAAAT ATAGAACAAG CAGTTGTAAA TGCTTGGAAT AATGTGTTGA CAGCAAAGGC CATTATCAAA GCAAGTCAAG AAGCGGAAAA AGCAGCAGCT CTAGCATTGG AAGGAGTTGA GCAAGAAGTA AACTTAAATT TAAAGAGTAC ATCTGACCTT TTGGACACTG AAGATGCATT ATTTAAAGCA CGTTCAGACT TAGTTGAAGC AAAAAGCAAT TATGTGATTA GTGTTTACAA CTTGCTTTTT ATGATAAATA GTATAAACCT CTAA
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Protein sequence | MFRLIITLAI IFNTISCYAT DVGEVISKAI KNSSKIKSQF YQYKSAEKHY KSSGLAGFLP DINLQYNFDS NFNLDTSEKK LTLRQKLIDG GGTFATFSRS SHLLKAEKMR FQQLKQELAL NAVKAYVNVL QKTEILKLRE HKERVSLEHL SAMKKRFSLG EVTNAEVLLA KAKFSSSISE RVDAEGKLKL VNIAYYHLIG EDADDLSEAN DKLPSVPELN ECLQLAKTNN LSLKAAVYQK RAAGMEVIAE SSKWLPSLNL SASKNFGEDG MKVDKLLENV HVVFTLDVPI FKRGVNAFGV SKAKMDAKKS TYDYYETVKN IEQAVVNAWN NVLTAKAIIK ASQEAEKAAA LALEGVEQEV NLNLKSTSDL LDTEDALFKA RSDLVEAKSN YVISVYNLLF MINSINL
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