Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2131 |
Symbol | |
ID | 3103515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2293572 |
End bp | 2296646 |
Gene Length | 3075 bp |
Protein Length | 1024 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637171281 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | YP_114557 |
Protein GI | 53803797 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGA GCGACATTTC CATCCGCCGG CCGGTGCTGG CGACGGTGAT GAGCCTCGCT TTGGTGCTGG TCGGGCTGAT GTGTTTCCAG CGCCTGCCGG TGCGGGAGTA TCCCAACATC GATGCACCCG TAGTCTCGGT CCGCAGCGTC TACAAGGGCG CCAGTTCGGA GGTGATCGAG AGCCAGGTGA CGCGGCCGCT GGAGGACTCG CTGTCCGGCA TCGAAGGCAT CCGGACCATG AAGTCGGTCA GCCGCGAAGA AGTCAGCCAG ATCACCCTCG AGTTCAACGT CAGCCGCGAC CAGGATTCGG CGGCGGCCGA TGTGCGCGAC CGGGTGTCGC GGGTCAGGGC CCGGCTGCCG CGCGAGATGG ACGAACCCGT CATCAGCAAG ATCGAAGCCG ACGCCCAGCC CATCCTGTGG CTTGCTTTTT CCAGCGATCG CCATAGTCCC CTGGAAATCA CCGATTTCGC CGATCGTTAC GTGCAGGACC GGCTGCAGAC TCTGCCGGGC GTCGCCAGTG TGATCATCGG CGGTGAACGC CGCTATGCGA TGCGGCTGTG GCTCAACCGC GAGCGGATGG CTGCCCACGG GGTGACGGTG CAGGATGTCG AGGCGGCGCT GCAGAAGCGC AACGTCGAAC TGCCAGGCGG ACGCATCGAA AGTGCACAGC GCGAGTTCAC CGTATTCAGC GAGACCGACC TGAAAACGGT CGAAGAATTC AACGCTCTGA TCGTCCGGGA GGTGAACGGT TTTCTGGTGC GGCTGTCGGA CATCGGTCGG GCCGAGCTGG GGGCGGCGGA TGAGCGCAAC ATCGTGCGGG TGAACGGCAA TCCGGCGGTG GCGCTGGGGG TGGTCAAGCA GGCCACGGCC AACACCCTGG AGGTGGCCCG GTCGGTGCGG GCGGAGCTGC CGAAAATCCT GCAAACCCTG CCGGACGGGA TGACGCTGGA AGTGTCCTTC GACACCTCCC AGTTCATCGA CGAGTCCATC CATTCCGTCT ACAAGACCCT GGCCGAGTCC CTGGGGTTGG TCACGCTGGT TACCTGGTCG TTTCTGCGTT CGGCGCGCGC TACCCTCATC CCGTTCGTGA CCATCCCGGT CTCTCTGATC GGCGCCTTCA TCTTCATTTA TGCGCTGGGG TTTTCGGTCA ACATTCTGAC CCTGCTGGCG TTGGTGCTCG CCATCGGCCT GGTGGTGGAT GACGCCATCG TGATGATGGA GAACATCTAC CGGCGCATCG AAGGCGGTAC GCCCCCTTTG AGGGCGGCGG TCGAGGGCAG CCGGGAAATC GCCTTCGCGG TGATTGCCAT GACGTTGACG CTGGCTTCGG TCTTCGCGCC GCTGGCGTTC ATGAGCGGCA ATACCGGCCG GCTGTTCTCT GAATTCGCTC TGGCGGTGTC CTGCGCAGTG CTGGTCTCCG GCTTCGTGGC GCTGACGCTG ACCCCGATGA TGTGCTCACG CCTGTTGAAG CCGGGCGCTA CCGTCAGGAC GGGGCGGGCC GAAAGCGGCC AGGCCTCCGG TTTCACGGCG CTCTACCGAA AGGGGCTCGA GGCCGCCTTG CGGCACCGGT GGGCCGTGAT CGGGGTGATG CTGGGTATAG CCGTCGGCGC GGTAGGGCTG TTCCGTGCGC TCAACGCGGA ACTGTCGCCG CTGGAGGACC GCGGCAACAT CATCATCATG ATCGCGGCCC CCGAAGGTGC GACCGTAGAG TACACCGACC GTTATGCCCG CGAAGTCGAG GCGATGGTCC AGCCGATCCC GGAAGTCCGG AGTTATTTCA TGGTGGTGGC GCCGGGGTTG GACCGGCCCA ACCCGGTGAA TTCCGCGATC GGTTTCGTGC GCCTGAAGCC ATGGCAGCAG CGCCACCGCT CGCAGCAGGA GATCGCGGCG ACCTTGTTGC CGAAGCTGAT GGCCTTGCCG GGGGTGATGG CTTTCGCCAT CAATCCTCCT TCCCTGGGGC AGAGCTTCCG CAGCCCGCCC GTGCAGTTCG TGATCCAGGG GCCGACCTAC GAAAAGCTCG ATGGTGTGGC GGCGCAATTG GTCGACCGGG CCCGGCAGTA CGCCGGCTTG GTCAACGCCG ATACCGACCT CAAGCTCGAT AAGCCGCAGA TCAGTGTGCA GGTGAACCGG GAAAAGGCCG CTGACGTCGG GGTCGACGTC GACGAGATCG GCCGGACGCT GCAGACGCTG CTGGGCGGCC GTCAGGTGAC GCGTTTCAAG AAAGGCGGTG AACAGTACGA CGTGATCGTC GAACTGGAGG ATGCCGAGCG GATGACCGTG AACGACGTGG GCTCGATCTA CCTGCGCGGT GCCGGCGGCC GGCTGGTCCA GCTCGCCAAT CTGGTCGAGA CCCGGGAAAA AGGCGCGGCC AAGGAACTCA ACCATTTCAA CCGGCTGCGT TCGGCGGTGC TGTCTGCCAG CGTCACCCCC GGCTTCACAT TGGGTGAGGC CCTGTCCTAC CTCGGCGCAG CGGCGAAGGA GATTCTGCCG GCCGATTTCA AGACCGATCT CGATGGCCAG TCGCGCGAGT TCGTCGAATC CAGTCGCACG CTCTACCTCA CCTTCGTGTT CGCGCTGCTG TTCATTTATC TGGTGCTCGC GGCGCAGTTC GAGAGCTTCT CCGATCCGTT CATCATCATG CTCACTGTGC CACTGGCCGT GACCGGTGCG CTGCTTTCAC TGAAATGGAC CGGTGGCACC CTCAATGTCT ATAGCCAGAT CGGCATGATC ATGCTGATCG GCCTGGTGAC CAAGAACGGC ATTCTGATCG TGGAGTTTGC CAACCAGCTC CAACGGGCGG GGCGCGGTCT CGTGGAGGCT GTGGTCGAGG CCTCCGTGCT GCGCTTCCGG CCGATCCTGA TGACCTCGCT GACCATGATT CTGGGCGCCC TGCCGCTGGC CTTGTCGTCG GGCGCCGGGG CCGAGAGCCG GCAGCAGATC GGCTGGGTCA TCGTCGGTGG ACTGCTCATC GGGACCGTAT TCACAGTGTT CGTCATTCCG GCCGTATATA CCCTGCTGGC CAAGCCTCCG AGGACGCAGG ACGAAGGGAA CGAAAGGGCG GCCGGCGTGG TCTAG
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Protein sequence | MTLSDISIRR PVLATVMSLA LVLVGLMCFQ RLPVREYPNI DAPVVSVRSV YKGASSEVIE SQVTRPLEDS LSGIEGIRTM KSVSREEVSQ ITLEFNVSRD QDSAAADVRD RVSRVRARLP REMDEPVISK IEADAQPILW LAFSSDRHSP LEITDFADRY VQDRLQTLPG VASVIIGGER RYAMRLWLNR ERMAAHGVTV QDVEAALQKR NVELPGGRIE SAQREFTVFS ETDLKTVEEF NALIVREVNG FLVRLSDIGR AELGAADERN IVRVNGNPAV ALGVVKQATA NTLEVARSVR AELPKILQTL PDGMTLEVSF DTSQFIDESI HSVYKTLAES LGLVTLVTWS FLRSARATLI PFVTIPVSLI GAFIFIYALG FSVNILTLLA LVLAIGLVVD DAIVMMENIY RRIEGGTPPL RAAVEGSREI AFAVIAMTLT LASVFAPLAF MSGNTGRLFS EFALAVSCAV LVSGFVALTL TPMMCSRLLK PGATVRTGRA ESGQASGFTA LYRKGLEAAL RHRWAVIGVM LGIAVGAVGL FRALNAELSP LEDRGNIIIM IAAPEGATVE YTDRYAREVE AMVQPIPEVR SYFMVVAPGL DRPNPVNSAI GFVRLKPWQQ RHRSQQEIAA TLLPKLMALP GVMAFAINPP SLGQSFRSPP VQFVIQGPTY EKLDGVAAQL VDRARQYAGL VNADTDLKLD KPQISVQVNR EKAADVGVDV DEIGRTLQTL LGGRQVTRFK KGGEQYDVIV ELEDAERMTV NDVGSIYLRG AGGRLVQLAN LVETREKGAA KELNHFNRLR SAVLSASVTP GFTLGEALSY LGAAAKEILP ADFKTDLDGQ SREFVESSRT LYLTFVFALL FIYLVLAAQF ESFSDPFIIM LTVPLAVTGA LLSLKWTGGT LNVYSQIGMI MLIGLVTKNG ILIVEFANQL QRAGRGLVEA VVEASVLRFR PILMTSLTMI LGALPLALSS GAGAESRQQI GWVIVGGLLI GTVFTVFVIP AVYTLLAKPP RTQDEGNERA AGVV
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