| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2046 |
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| Symbol | speE |
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| ID | 3104171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 2199127 |
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| End bp | 2199984 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637171200 |
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| Product | spermidine synthase |
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| Protein accession | YP_114477 |
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| Protein GI | 53803635 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGACG CACAGGACTG GTTTACCGAA TCCTATCCCG ATAATGGCAG TGCGCTGTCG
CTGAAAATCA GGGCTAAGCT GCACGAGGAG CAGACACCCT TCCAGCGCAT CGAGATCTAC
GATACCGAAT CGTTCGGCAA GCTCATGGTG ATCGACGGCT GCACCATGGT GAGCGACCGC
GACAATTTCC TCTATCACGA AATGATGACG CATCCCGTGC TGTACACCCA TCCCGCGCCG
AAGACCGTGT GGATCATCGG CGGCGGAGAC TGCGGCAGCC TGCGAGAGGT GTTGAAGCAC
TCTGAAGTCG AGAAGGCGGT GCAGATCGAC ATCGACGAGC GGGTGACGCG GCTGGCGGAA
CGGTATTTCC CCGAACTGTG CGAAGCCAAC GGCGACCCCC GCGCGGAGCT GTTGTTCATC
GACGGCATCC AGTGGGTGAA GGAGGCGCCG GATGGGTGCG TTGACGTCAT CATCGTCGAC
AGCACCGATC CCGTCGGTCC GGCGGAAGGG CTGTTCAACG AGGCGTTTTT TCGCCAATGC
CACCGCTGTC TGCGCACCGA CGGTATCCTG GTGCAGCAGA GCGAATCGCC CCTGTTCCAC
CTGCCTCTCA TTGCCTCGAT GCATCGCATC ATGCGGCAGG CGGGTTTTGC CCAGACGCGC
ACGCTGTTCT TCCCGCAATT CATCTATCCC TCGGGCTGGT GGAGCGCGAC CATGGCGGGT
AAGGGGGACC TGAACCGGTT CCGCGCGGAT GCGGCGGAGG CGAAGCTGTT TCCGACCCGG
TATTACAACG CGGACATCCA CCGGGCCGCG TTCGCCGTTC CGGAATTTTT CGGCGATGCC
CTGCGCGAGT TGGTCTGA
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| Protein sequence | MCDAQDWFTE SYPDNGSALS LKIRAKLHEE QTPFQRIEIY DTESFGKLMV IDGCTMVSDR
DNFLYHEMMT HPVLYTHPAP KTVWIIGGGD CGSLREVLKH SEVEKAVQID IDERVTRLAE
RYFPELCEAN GDPRAELLFI DGIQWVKEAP DGCVDVIIVD STDPVGPAEG LFNEAFFRQC
HRCLRTDGIL VQQSESPLFH LPLIASMHRI MRQAGFAQTR TLFFPQFIYP SGWWSATMAG
KGDLNRFRAD AAEAKLFPTR YYNADIHRAA FAVPEFFGDA LRELV
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