Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2040 |
Symbol | gltD |
ID | 3104458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2191170 |
End bp | 2192609 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637171195 |
Product | glutamate synthase subunit beta |
Protein accession | YP_114472 |
Protein GI | 53803649 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.401643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAC CCACCGGTTT CATGGAAATC GCGCGGCAGG ATCGGCGTTA TACCCTGGTC GCCGACCGGA TTCAGCACTA CCGCGAATTC GTCGTGCCGC TGAGCGACGA GGAAGTCAGC CGTCAGGGCG CGCGTTGTAT GGACTGCGGC ATCCCCTATT GCCACCAGGG CTGCCCGATC AACAACATCA TTCCCGATTG GAACGACCTG GTATACCAGG GTGACTGGGA GGAAGCCCTC GAGGTACTGC ACAGCACCAA CAATTTCCCG GAGTTCACTG GTCGCATCTG CCCGGCTCCC TGCGAAGCGG CTTGCACGTT GAACCTCAAT GACGAACCGG TCACCATCAA GACCATCGAA TGCGCCATTG CGGACAAGGC CTGGGAAGAG AATCGGATCC GGCCGCAGAT TCCCAGCAGG CGCACGGACA AGCGGGTCGC GGTGGTAGGC TCCGGGCCGG CCGGTCTCGC CTGCGCCCAG CAACTGGCAC GCGCAGGTCA CGGCGTGGTG GTCTATGAAA AGGCCGACCG CATCGGCGGC CTGCTGCGCT ACGGCATTCC CGACTTCAAG ATGGAAAAGC ATCTCATCGA CCGCCGCATC GCCCAGATGC AGGCGGAAGG CGTGATCTTC CGTCCCAACA GCCATATCGG CGCCAACATT CCGCTGAGCC GGCTGATGGC CGAATTCGAC GCCATCGTGC TGGCGGGTGG CTCGGAAAAA CCACGCGACC TTCCCGTTCC CGGACGCGAA TTGGCCGGCA TCCATTTCGC GATGGAGTTC CTCAAGCAGC AGAACCGGCG TGTCGCCGGT GATACGATAG ACGAAGCAGA AGGCATTCTG GCGACCGACA AACACGTCAT CGTCATCGGC GGCGGCGATA CCGGTTCCGA CTGCATTGGC ACCTCGGTGC GCCAGGGAGC CGCCTCGGTG GTGCAGTTGG AAATCCTGCC CCAACCGCCG GCCAAGGAAG ACAAGAGTCT CACCTGGCCG AACTGGCCGA ACCGGCTGCG CACTTCTTCC TCCCAGGAGG AGGGCTGTGA ACGGCATTGG AGCATCGCAA CCAAGCGTTT CAGCGGTGAA AACGGCAAGG TGACCGCGAT CCATTGCATC AAGGTCAACT GGAAACAGGA AGGCGGGCGC TGGGTCATGG AGGAAATTCC CGGCACCGAG TTCACACTCC AGGCCGACCT GGTTCTACTC GCCATGGGCT TCGTCCATCC GGTACAGGAG GGACTGCTGC AGGAAACCGG CGTCCGGCTG GACGAACGCG GCAATGTCCA GGCGGATACT CGAAACTATC GGACTTCGGT GGACAAGATC TTCGCGGCCG GCGACATGAG GCGAGGACAG TCGCTGGTGG TCTGGGCCAT ACGCGAGGGA CGCCAGGCAG CCCGCGCGGT GGACGAGTTC CTCATGGGCC GATCCGACTT GCCGCGGTAA
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Protein sequence | MGKPTGFMEI ARQDRRYTLV ADRIQHYREF VVPLSDEEVS RQGARCMDCG IPYCHQGCPI NNIIPDWNDL VYQGDWEEAL EVLHSTNNFP EFTGRICPAP CEAACTLNLN DEPVTIKTIE CAIADKAWEE NRIRPQIPSR RTDKRVAVVG SGPAGLACAQ QLARAGHGVV VYEKADRIGG LLRYGIPDFK MEKHLIDRRI AQMQAEGVIF RPNSHIGANI PLSRLMAEFD AIVLAGGSEK PRDLPVPGRE LAGIHFAMEF LKQQNRRVAG DTIDEAEGIL ATDKHVIVIG GGDTGSDCIG TSVRQGAASV VQLEILPQPP AKEDKSLTWP NWPNRLRTSS SQEEGCERHW SIATKRFSGE NGKVTAIHCI KVNWKQEGGR WVMEEIPGTE FTLQADLVLL AMGFVHPVQE GLLQETGVRL DERGNVQADT RNYRTSVDKI FAAGDMRRGQ SLVVWAIREG RQAARAVDEF LMGRSDLPR
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