Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA1409 |
Symbol | psd |
ID | 3103969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 1496184 |
End bp | 1497050 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637170585 |
Product | phosphatidylserine decarboxylase |
Protein accession | YP_113867 |
Protein GI | 53804267 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.360233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATGG CCGCCTTGCC GTTCAAGCTG TTTGCCAGCA TCCAATATCT GCTGCCTCAA CACGGCCTTT CACGGTTCGT GCACTGGGCG GTCCGCATTC GCCAGCCCTG GTTCAAGAAT GCTCTGATCC GTGCCTTCTG CAGGTTCTAT CGGGTCGATC TCGCGGAGTC CGTCTGCAGT TCGCCGGAGT CGTTCGAGTG CTTCAACGCC TTTTTCACAC GTGCGCTGAA ACCCGGCGTG CGATCGGTCT GCAGCGAGCC CGACGCCATC GCCTGTCCGG CGGACGGTAT GATCAGCCAG CTCGGTGCCA TCAAGGGTAC ACGGTTGTTC CAGGCCAAAG GACGCTGCTT CGAACTGGCC GAACTGCTTG GCGGTGATCG CAGCCGGACA GAGGCATTCG AAAACGGTAG CTTTGTCACG GTCTATCTTT CGCCCCGTGA TTACCACCGT GTCCATATGC CGGTGGCAGG CACCCTGGCA GCTATGACGC ATGTGCCAGG CGCCCTGTTC AGCGTCAACG TCGCGACGAC GGAAAACGTC CCGAATCTCT TTGCACGAAA CGAACGGCTG ATCTGTTATT TCGATACCGC CGGGGGACCG ATGGCGGTCA TTCTGGTTGG CGCGATTTTC GTGTCGAGCA TTGAGACCGT CTGGCACGGC GAGGTCACAC CGCCCCGCTC GAAGACGATC AGGCGGTGGG ATTACTCAGG GCAAGGCCTC CGATTCGAAC GCGGTGCTGA AATCGGCCGC TTCAACATGG GATCGACCGT GATCGTCCTT TTCGGTCCCG GCCACGCGCG CTGGAGGGCC GGGATCGGTG CCGGCATGTC CGTCAAGATG GGGTTGTCGC TGGGGTCTTG CCGCTGA
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Protein sequence | MIMAALPFKL FASIQYLLPQ HGLSRFVHWA VRIRQPWFKN ALIRAFCRFY RVDLAESVCS SPESFECFNA FFTRALKPGV RSVCSEPDAI ACPADGMISQ LGAIKGTRLF QAKGRCFELA ELLGGDRSRT EAFENGSFVT VYLSPRDYHR VHMPVAGTLA AMTHVPGALF SVNVATTENV PNLFARNERL ICYFDTAGGP MAVILVGAIF VSSIETVWHG EVTPPRSKTI RRWDYSGQGL RFERGAEIGR FNMGSTVIVL FGPGHARWRA GIGAGMSVKM GLSLGSCR
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