| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA0813 |
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| Symbol | sqs |
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| ID | 3102259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | - |
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| Start bp | 855386 |
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| End bp | 856474 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637170019 |
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| Product | squalene synthase |
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| Protein accession | YP_113313 |
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| Protein GI | 53804819 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.493188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAA CACCCCCCTC ACAGCCCGCC AGACATGAGC ATCTGTCGGA CGACGAATTC
CAGGCCCATT TCCTGGACGG CGTATCCCGT ACTTTCGCTT TGACGATCCC GAGGCTGCCG
GAAGGTTTGG CCCGTCCGGT ATCCAACGGC TACCTGCTGT GCCGTATCGT CGACACCATC
GAAGACGAGG TGGCGCTGAC GTCGACCCAA AAGCGGCGAT ATTGCGAGCA TTTCGCCCGG
GTCGTCGCCG GAACGGCACC CGCTGCCCCG CTCGCCGACG AACTCTTTCC ACTGCTCTCC
GACCAGACCC TGGCCGCCGA GCGGGAGCTG ATCGCCGCCA TTCCGCGCGT CATCAGCATC
ACCCATGGCT TCGCCGCGCC GCAGCAGGAG GCACTGGCCG AGTGCGTGGC CACGATGTCT
AGAGGAATGG CCGAGTTTCA GGACAAGGAC CTGCGGCACG GTCTCGAGGA CCTGCGACAG
ATGGGCGATT ACTGCTATTA CGTCGCCGGC GTGGTCGGAG AAATGCTGAC TCGGCTGTTC
TGTCACTACT CCCCGGAAAT CGCCGCACAT CGGTCGCGGC TGATGGAACT CGCGGTGTCC
TTCGGACAGG GACTGCAGAT GACCAACATA CTGAAGGACC TGTGGGATGA CCATGCGCGC
GGCGTCTGCT GGCTGCCGCA GGAGGTGTTC ACGGAATGCG GTTTCTCCCT CACCGAGCTC
CGGCCGCACC ACGCCAACCC CGATTTCGTC CGCGGCTTCG AGCGACTGAT CGGCGTGGCC
CACGCCCACC TGCGCAATGC GCTGGAATAT ACGTTGCTGA TCCCGCGCCA TGAAACCGGC
ATCCGCGAAT TCTGCCTCTG GGCTCTGGGG ATGGCGGTGC TCACGCTGCG CAAGATCCAT
CGTCACCCCT ATTTCAGTGA TTCCGCCCAG GTGAAGATCA CACGGCAGGC AGTCAAGGCG
ACGATCGTCA CCTCGCGGCT GACCCGCGGC AGCGACACCT TGCTGAAAGC CACGTTCCGG
CTCGCCGGTC TCGGCCTGCC CGCCGCGGTG CCTGCCGCTG TGCTGCAGCC CCGGCCCATC
GACATTTGA
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| Protein sequence | MSGTPPSQPA RHEHLSDDEF QAHFLDGVSR TFALTIPRLP EGLARPVSNG YLLCRIVDTI
EDEVALTSTQ KRRYCEHFAR VVAGTAPAAP LADELFPLLS DQTLAAEREL IAAIPRVISI
THGFAAPQQE ALAECVATMS RGMAEFQDKD LRHGLEDLRQ MGDYCYYVAG VVGEMLTRLF
CHYSPEIAAH RSRLMELAVS FGQGLQMTNI LKDLWDDHAR GVCWLPQEVF TECGFSLTEL
RPHHANPDFV RGFERLIGVA HAHLRNALEY TLLIPRHETG IREFCLWALG MAVLTLRKIH
RHPYFSDSAQ VKITRQAVKA TIVTSRLTRG SDTLLKATFR LAGLGLPAAV PAAVLQPRPI
DI
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