Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA0652 |
Symbol | cas4 |
ID | 3102078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 686049 |
End bp | 686681 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637169863 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_113165 |
Protein GI | 53804987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.915701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGAAA CATTCCCCAT TCCCCTCTCC GCCCTCCAGC ACTACAGCTA TTGCCCCCGG CAATGCGCGC TGATCCACCA GGAACAGATG TTTACCGATA ACGTCTTTAC CCTGCGCGGC CGGCGCGTGC ATGAACGGGT AGACGAGCCG GATACTCGCC ATGAACCGGA CGTGCGCATC GAGCAGGCGT TGACTCTGTT CAGCGATCGG CTGGGTTTGA CTGGCAAGGC CGACATCGTA GAGTTTCTGC CGGACGGCAC GCCGCGCCCG GTGGAATACA AGCACGGCCC GCGACGGCAG CGCGAGCACG ATGACGTTCA GGTGGCAGCT CAGGCGCTGT GTCTGGAGGA AATGACAGGC AAGGAGGTGC CGGAAGGGGT GATCTACCAT CACAGCTCGC GAAGGCGGCG CGTGGTGCCG ATCACACCGG AGTTGCGGAT AAAGACCGAA AGGCTCATCC ACGAAGTACG CGCCCTGTTG GCTTCTGGGA AACTGCCGCC GCCGGCGAGT GAGCCGGAAC GCTGCCGGGG CTGTTCCATG ATCGAAATCT GCCAGCCGGA GATGCTCAAA TCCGCCGCCG AGATCGACCG GCTCGCGCAA ACCCTGTTCG AACCGGAAGA GGACCTTCCA TGA
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Protein sequence | MDETFPIPLS ALQHYSYCPR QCALIHQEQM FTDNVFTLRG RRVHERVDEP DTRHEPDVRI EQALTLFSDR LGLTGKADIV EFLPDGTPRP VEYKHGPRRQ REHDDVQVAA QALCLEEMTG KEVPEGVIYH HSSRRRRVVP ITPELRIKTE RLIHEVRALL ASGKLPPPAS EPERCRGCSM IEICQPEMLK SAAEIDRLAQ TLFEPEEDLP
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