Gene MCA0142 details

Gene Information

• Locus tag: MCA0142
• Symbol: cax-1
• ID: 3103491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 147294
• End bp: 148376
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637169367
• Product: calcium/proton exchanger
• Protein accession: YP_112681
• Protein GI: 53802575
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0387] Ca2+/H+ antiporter
• TIGRFAM ID: [TIGR00378] calcium/proton exchanger (cax); [TIGR00846] calcium/proton exchanger

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGTCG GGAAATTCGA AGTCGATCAC ATGGCGTTGC TGCTGGTTTT CGTGCCGGTC 
AGCATCGTGC TGGAGTGGGT TCATGCGGAC CCGGTATGGA TTTTCGCGGC GTCCGCGCTG 
GCGATCGTCC CGCTGGCGGG CCAGATGGGG AAGGCCACCG AATATCTCGC CGAACACCTC 
GGCTCGGGGC TGGGTGGGCT GCTCAATGCC TCGTTCGGCA ATGCGGCTGA GCTGATCATC 
GGCTTCTTCG CGCTGCGGGC GGGTCTGATC GACGTGGTCA AGGCCTCGAT CACCGGATCG 
ATCATCGGCA ACATCCTGCT GGTGCTGGGT GCCAGCGTGG TGGTCGGCGG GCTGAAGCAC 
GAAACCCAGT ATTTCAACCG TACGGCCGCC GGCCTGGGCG TCACCCTGGC CGCGCTCAGC 
GCGATCGCTC TGGTGGTGCC CGCGATCTTC CACTTGGTCG TCCAGGGGCA CCCGGAGCCT 
CATGAACGGG AACTGAGCCT GGAAATCGCC CTGGTGCTGT TCGTCACCTA CATCCTCAGC 
CTGGTGTTCA CCCTGCGCAC CCACCGTCAT CTGTACGTCG GCGAGTCATC GGAGGAAACC 
GACGAGGCGC TCGGGGTGGG TGCCTGGAGC ATGCGCAAGT CGTTGCTGAT TCTGCTGGTG 
GCCACTGCGC TCGTCGCCTG GATGAGCGAA CTGCTGGTGG GGGCGGTGGA GCACGCGGCG 
CACGACCTCG GCATGACCAA CGTCTTCATC GGCGTGATCC TCGTCGCCAT CGTCGGCAAT 
GCGGCCGAGC ACAGCACGGC GGTGATGATG GCGGCCAAGA ACCACATGGA CCTGGCCATG 
AACATCGCCA TCGGTTCCAG CATCCAGATC GCCCTGTTCG TCGCCCCGCT CCTGGTGTTC 
GCCGGCCATG TAATGGGGCA GCCCATGGAT CTGGTGTTTT CCACCTTCGA AGTCGTCGCG 
GTCGCGATCG CCGTCGCTGC GGTGGTCCTG ATCGCGATGG ACGGTGAGTC GAACTGGATG 
GAGGGAGTCA ACTTGCTGGC GGTCTATGTC ATCCTCGCCA TTGCTTTCTA TTTTCTTCCG 
TAG 

 

Protein sequence

MRVGKFEVDH MALLLVFVPV SIVLEWVHAD PVWIFAASAL AIVPLAGQMG KATEYLAEHL 
GSGLGGLLNA SFGNAAELII GFFALRAGLI DVVKASITGS IIGNILLVLG ASVVVGGLKH 
ETQYFNRTAA GLGVTLAALS AIALVVPAIF HLVVQGHPEP HERELSLEIA LVLFVTYILS 
LVFTLRTHRH LYVGESSEET DEALGVGAWS MRKSLLILLV ATALVAWMSE LLVGAVEHAA 
HDLGMTNVFI GVILVAIVGN AAEHSTAVMM AAKNHMDLAM NIAIGSSIQI ALFVAPLLVF 
AGHVMGQPMD LVFSTFEVVA VAIAVAAVVL IAMDGESNWM EGVNLLAVYV ILAIAFYFLP