Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2471 |
Symbol | |
ID | 3241586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2523971 |
End bp | 2525116 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 637169145 |
Product | type I restriction-modification system S subunit |
Protein accession | YP_190014 |
Protein GI | 57865902 |
COG category | [V] Defense mechanisms |
COG ID | [COG0732] Restriction endonuclease S subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0091078 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAC ACACAAATAC TCCAGAATTA AGATTTCCAG AATTTAGAGA AGAATGGAAT ATTGAACAAG TTTCTGATTT TTTGATAGAA AGTAAAATAG TAGGTCATAA AGGTAACCAA GCTAAAAAAT TAACGGTTAA GCTTTGGGGA AAAGGTATAG TGGAGAAAGA AAGTATATTT AAAGGCAGTA GTAATACTCA ATATTATATA CGAAAAGCTG GCCAACTAAT GTATGGAAAG TTAGATTTTC TAAATTGTGC CTTTGGTCTA GTTCCAACTG AATTGAACAA TTTTGAAAGT ACCATTGATT CACCAAGTTT CGACTTTATA AAAGGTGACA AAAAATTTTT ATTAGAAAGA ATTAAAATGA AATCTTTTTA TAAAAAATAT GGAGATTTAG CTAATGGCAG TAGAAAGGCT AAAAGAATTA ATCAAAATAC TTTTTTATCT ATGCCATTAT ATGCACCTAC TATTAACGAA CAAAAAAAAA TTGGTGATTT CTTTAGCAAA CTCGACCGCC AGATTGAGTT AGAAGAGAAG AAATTAGAAT TGTTAGAGCA ACAAAAGCGT GGATATATGC AAAAGATTTT CTCACAACAA CTTCGCTTTA AAGATGAAAA AGGGAATGAT TATCCAAAGT GGATTTTTAA AAAATTCGAA GAAATATTTA AAGTTGTCCC ATCAAAAAAA TATCAAATAA AATCTTCTGA AATTGAAGAT AACGCAAGTA TTCCAGTAAT TGATCAAGGG CAAAATTTGA TTTTAGGTTT TTCAAATAAT AAAGAAAAAG TATTCAATGA TTTTAAAAAT GTAATTATTT ATGGAGATCA TACCACAGTT ATAAAGAGAA GTGATAAGCC TTTTATAATT GGAGGAGATG GAGTTAAGTT GTTAACTTCT AAAGTAGACA GTGATATATC ATATTTATAC AATGCTCTAC AATATTTTAA TGTGAAATCT GAAGGATATA AGCGACACTT TAGTATACTT AAGAATAAAG ATTTTTACAT ATCAACTTCT ATCGAAGAAC AAAAAAGAAT AGCTAATATT TTTAATAAAT TAGATAAATA TATAGAAAAA CAATTTGCTA AAGTTGAACT ATTAAAACAA CGCAAACAAG GATTACTACA GAAAATGTTT GTGTAA
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Protein sequence | MTEHTNTPEL RFPEFREEWN IEQVSDFLIE SKIVGHKGNQ AKKLTVKLWG KGIVEKESIF KGSSNTQYYI RKAGQLMYGK LDFLNCAFGL VPTELNNFES TIDSPSFDFI KGDKKFLLER IKMKSFYKKY GDLANGSRKA KRINQNTFLS MPLYAPTINE QKKIGDFFSK LDRQIELEEK KLELLEQQKR GYMQKIFSQQ LRFKDEKGND YPKWIFKKFE EIFKVVPSKK YQIKSSEIED NASIPVIDQG QNLILGFSNN KEKVFNDFKN VIIYGDHTTV IKRSDKPFII GGDGVKLLTS KVDSDISYLY NALQYFNVKS EGYKRHFSIL KNKDFYISTS IEEQKRIANI FNKLDKYIEK QFAKVELLKQ RKQGLLQKMF V
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