| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1239 |
|---|
| Symbol | tig |
|---|
| ID | 3241044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1274859 |
|---|
| End bp | 1276160 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 637167890 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_188813 |
|---|
| Protein GI | 57867150 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00475597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA CTTGGGAAAA AAAGGAAGGT AATGAAGGCG TTTTAACTGT TACTGTTCCT
GCAGAGAAAG TAAATAAAGC ATTAGATCAA GCATTTAAAA AAGTGGTCAA ACAAATTAAT
GTGCCTGGAT TCCGTAAAGG TAAAGTGCCT CGTCCAATTT TTGAGCAACG TTTTGGTGTA
GAAGCACTTT ATCAAGATGC AGTGGATATT TTATTACCTG AAGCTTATGG TGAAGCAATT
GAAGAAACAG AAATTAATCC AGTTGCACAA CCAGAAGTTA ATGTAACTCA AATCGAAAAA
GGTAAAGATT TCATTTTTGA AGCTACAGTT ACAGTTGAAC CTGAAGTTAA ATTAGGTGAT
TACAAAGGAT TAGAAATTGA AAAGCAAGAA ACTGACCTTT CTGATGAAGA ATTACAAGAA
TCAATCGACC ATAGCTTAAG TCACCTTGCT GAAATGGTTG TTAAAGAAGA TGGTGCTGTT
GAAAACGGTG ACACAGTAAA CATTGATTTC TCAGGTTCAG TTGATGGTGA AGAATTTGAT
GGTGGACAAG CTGAAGGTTA TGACCTAGAA ATTGGTTCTG GATCATTCAT TCCTGGCTTT
GAAGAACAAA TAGAAGGAAT GAAAACTGGC GATGAAAAAG ATGTAGTTGT AACATTCCCA
GAAGAATACC ACGCTGAAGA ATTAGCTGGT AAAGAAGCTA CATTTAAAAC AAAAGTCAAC
GAAATTAAAT TCAAAGATGT ACCAGAATTA AATGATGAGA TTGCTAACGA ATTAGATTCT
GATGCTGAAA ACGTGGACGA ATATAAAGAA AATCTTCGCA AACGTTTAAG TGAACAGAAA
GCAACTGAAG CTGAAAATAC TGAAAAAGAA GAAGCTATTA ATAAAGCAAC AGAAAATGCT
TCAATTGATA TTCCTGAAGC AATGATTAAT ACTGAATTAG ATCGTATGAT TCAAGAATTT
GGTCAAAGAA TCCAACAACA AGGCTTAGAT TTGCAAACAT ATTATCAAAT CTCTGGTCAA
AACGAAGAGC AACTAAGAGA CCAAATGAAA GACGATGCAG AACAACGCGT TAAAACAAAC
TTAACGTTAA CTGCGATTGC TGATGAAGAA AATATTGAAG TATCTGATGA AGATATTGAT
AAAGAATTAG AAAAAATGAG CGAGCAATTT AACATTTCTG TAGAAGATAT TAAATCTACT
TTAGGTAATA CAGATATTGT TAAAAATGAT GTACGCATTC AAAAAGTTAT TGATTTATTA
AGAGATAATG CGAAATATGT TGAAGCTACT AAAGAAGACT AG
|
|---|
| Protein sequence | MTATWEKKEG NEGVLTVTVP AEKVNKALDQ AFKKVVKQIN VPGFRKGKVP RPIFEQRFGV
EALYQDAVDI LLPEAYGEAI EETEINPVAQ PEVNVTQIEK GKDFIFEATV TVEPEVKLGD
YKGLEIEKQE TDLSDEELQE SIDHSLSHLA EMVVKEDGAV ENGDTVNIDF SGSVDGEEFD
GGQAEGYDLE IGSGSFIPGF EEQIEGMKTG DEKDVVVTFP EEYHAEELAG KEATFKTKVN
EIKFKDVPEL NDEIANELDS DAENVDEYKE NLRKRLSEQK ATEAENTEKE EAINKATENA
SIDIPEAMIN TELDRMIQEF GQRIQQQGLD LQTYYQISGQ NEEQLRDQMK DDAEQRVKTN
LTLTAIADEE NIEVSDEDID KELEKMSEQF NISVEDIKST LGNTDIVKND VRIQKVIDLL
RDNAKYVEAT KED
|
|---|
| |