Gene SERP1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1004 
Symbol 
ID3242036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand- 
Start bp1018790 
End bp1019452 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content33% 
IMG OID637167658 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_188581 
Protein GI57866927 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAGT TCAAACAAGT GAGCAAATCT TTCAGAGATG GCAATCAAAT GATTCAGGCA 
GTAAAACCTA CCGATTTAAA AATAATTCAG GGGGAACTGA TTGCTATCGT GGGACCCTCA 
GGTTCAGGGA AAAGTACATT TTTAACTATG GCTGGCGCCT TACAAAGACC TACGTCAGGA 
AATATTTACA TCAATAACAA AAATATATCA ATATTATCTG AAAAACAGTT ATCTCAAATA 
AGAATTAACG AAATAGGTTT TATATTACAA TCGACGAATC TCGTGCCTTT TTTAACAATC 
GAACAACAAT TCAAACTTCT TGGTAAATAT AAAAAAGATA CATTAAGTGA AGATGAATAC 
CAAAAGTTGG TTAAACAGCT AAATTTATCG GATATTACCA ATCAATTACC AAATCAAATA 
TCTGGCGGTC AAAAACAGCG CGTGGCAATA GCTAAAGCTA TTTACACAAA TCCATCAATC 
ATACTAGCAG ATGAACCTAC CGCTTCACTA GATACGAATA ATGCAATGGC TGTAATGAAA 
ATACTTCAAA AACAAACGAA AGAAAGAAAT AAAACATGTG TGATTGTTAC TCATGATGAA 
CGTTTAACTC ATTTTTGTGA TAAAACATAT TTCATGGAGG ATGGAGTTCT TTCACTCCAA 
TAG
 
Protein sequence
MLEFKQVSKS FRDGNQMIQA VKPTDLKIIQ GELIAIVGPS GSGKSTFLTM AGALQRPTSG 
NIYINNKNIS ILSEKQLSQI RINEIGFILQ STNLVPFLTI EQQFKLLGKY KKDTLSEDEY 
QKLVKQLNLS DITNQLPNQI SGGQKQRVAI AKAIYTNPSI ILADEPTASL DTNNAMAVMK 
ILQKQTKERN KTCVIVTHDE RLTHFCDKTY FMEDGVLSLQ