Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0828 |
Symbol | cdsA |
ID | 3240986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 831728 |
End bp | 832510 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167487 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_188410 |
Protein GI | 57866735 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00232392 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA GAACATTAAC CGCGATTATA GCCTTATTAA TATTCTTGCC CATCTTGCTC AAAGGTGGCT TAATATTAAT GCTTTTCGCA TTCTTATTAG CTTTGATAGC CTTAAAAGAA CTACTTAATA TGAATATGAT CAAATTTTTA TCTATACCTG GTCTGATTAG TGCTTTAGCC CTAATTATTA TCATGTTACC TCAAGATGCA GGTGAATGGG TTCAAGTTAT CCAACTTAAA GGTTTAATTG CTATGAGTTT CATAGTTTTA AGTTATACAG TGCTATCTAA AAACAGATTT AGTTTTATGG ATGCTGCATT TTGTTTGATG TCTGTAGCAT ACGTAGGAAT TGGCTTCATG TATTTTTATG AGACACGTTC TGAGGGCTTG AGATATATTT TATTTGCATT TTTAATAGTT TGGCTAACAG ATACGGGTGC TTATATTTTT GGTCGCCTTA TGGGTAAACA TAAGTTATGG CCAGTCATTA GCCCTAATAA AACAATTGAA GGTTTCTTTG GTGGTATTTT ATGTAGCATT TTAGTACCAT TAGTGATGCA AATGTTTGTA GATTTACATA TGAATATTTG GCTTTTACTA TTAGTCACAA TTGTTTTAAG TATGTTTGGT CAATTAGGTG ATTTAGTAGA ATCTGGGTTT AAACGTCATT TTGGTGTTAA AGATTCAGGA CGTATACTAC CAGGACATGG TGGTATATTA GATAGATTTG ATAGCTTCAT GTTTGTATTA CCGCTATTAA ATATTTTACT GATACAAACT TAA
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Protein sequence | MKVRTLTAII ALLIFLPILL KGGLILMLFA FLLALIALKE LLNMNMIKFL SIPGLISALA LIIIMLPQDA GEWVQVIQLK GLIAMSFIVL SYTVLSKNRF SFMDAAFCLM SVAYVGIGFM YFYETRSEGL RYILFAFLIV WLTDTGAYIF GRLMGKHKLW PVISPNKTIE GFFGGILCSI LVPLVMQMFV DLHMNIWLLL LVTIVLSMFG QLGDLVESGF KRHFGVKDSG RILPGHGGIL DRFDSFMFVL PLLNILLIQT
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