Gene SERP0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0819 
SymbolhslV 
ID3242838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp824310 
End bp824852 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content39% 
IMG OID637167478 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_188401 
Protein GI57866719 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATT CTTTACACGC TACAACAATT TATGCTGTAC GCCATAATGG TGAAGCAGCT 
ATGGCTGGTG ATGGTCAAGT CACATTAGGT CAACAAGTTA TTATGAAACA AACTGCTAGA
AAAGTAAGAC GTTTATACGA AGGAAAAGTA TTGGCTGGTT TTGCAGGTAG TGTTGCTGAC
GCCTTCACAC TTTTCGAAAA ATTTGAGACA AAGCTTCAGC AATTTAGTGG TAATTTAGAG
CGCGCAGCTG TTGAACTAGC ACAAGAATGG CGTGGAGATA AACAATTACG ACAATTAGAG
GCGATGCTTA TCGTAATGAA TAAAGATGCC ATACTTATTG TTAGTGGTAC AGGTGAGGTT
ATTGCACCTG ATGATGATTT AATTGCCATT GGGTCAGGTG GTAACTATGC ACTTAGCGCA
GGTCGAGCAC TAAAAAGACA TGCAGCACAA CTTTCTGCTA GTGAAATGGC ATACGAAAGT
TTAAAAGTTG CAGCTGATAT TTGTGTGTTT ACAAATGACA ATATAATTGT AGAAACGCTA
TAA
 
Protein sequence
MDNSLHATTI YAVRHNGEAA MAGDGQVTLG QQVIMKQTAR KVRRLYEGKV LAGFAGSVAD 
AFTLFEKFET KLQQFSGNLE RAAVELAQEW RGDKQLRQLE AMLIVMNKDA ILIVSGTGEV
IAPDDDLIAI GSGGNYALSA GRALKRHAAQ LSASEMAYES LKVAADICVF TNDNIIVETL