| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE2502 |
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| Symbol | |
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| ID | 2741475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 2525874 |
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| End bp | 2527904 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637161394 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_973100 |
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| Protein GI | 42528002 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000989132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATCTCT TTAATAAAAG TATTTTAAAT TTTAAACTTG GAAAGTATTT AACCGAGTCA
AACATAGCGT ATATAATTTT TTCTCCGGAT TATGTCCCGC TTTTTTGGAG TCCTGAAGCG
GAAAGACTTT TACCCGACTA CCTGATTAAA AACACAAAAA TACGATTACA GGATTATTTA
AAAACAGTGC TGTTGGAAGA GGACTATATT AGGCTGTCCG CATTTATAAA AAGCAATCCA
AAAACAGCGG CTTTTGAAGC TAAATTTGAC AAACCCTCAA GCCTTTCGGA TAAGACAGCT
TTAAAGTTCA GCTTTACTCA ACAAGATGAT AATAATTTTT TTGTAACCAT TGATGACATT
ACCAAACAAA AATTAAAAGA ACGGTTTTTG ATAATCGCAA GACAAGATGC CGAAAAGGCA
AACAGTATGC GAAGCCTTTT TTTGGCAAAT GTAAGCCATG AAATAAGAAC GCCTATCCAA
ACAATAATAG GCATGATGGA GCTCATAAAC GAAACAAACC TTGATGAAGA GCAGAGCGAA
TATACCCGTC AGGTAAATTT TAGTGCTGAA GTTTTACTCA CACTTGTAAA CGACGTTTTG
GATTTTTCAA AACTTGAAAG CGGGAATATG ACAATGGAAA GGACGGTTTT TAACTTGACC
GATTCAGTTG AACAAACCGT AGATTTAATT TCGATGGAAG CTCATAAAAA AGGATTGGAA
ATTGTTGTAG ATATAAGCGA CAAAATTCCC GACTTTATAT ACGGAGATCC GGCAAGGCTG
CAGCAGGTTC TTTTAAACTT TGTAAAAAAT GCAGTTAAGT TTACCGAAAC AGGCTATGTC
TCGGTTTCGG TCAAACTGGT TTTTGAAAAT AACTCTGATG ATCCCTATGC GGCTAAACAT
TTCTTTATTC TTTTTGAAGT TGCAGATACG GGAATAGGAG TCAACAACGA ACAAAAATCA
AAAATATTCA ATTCCTTTTA TCAGGGGAAT GCTGCAATAA ACAGAAAATA CGGGGGAACA
GGCCTAGGGC TTGCAATTTC TAAAAATATT ATAACTATGA TGAAGGGTCA AATAGGAATA
AAAGACAATA TTCCCAGAGG ATCGGTTTTT TGGTTTAAGA TTCCTTTAGT CCCTTCAAAG
AAAAAAGCTC CTCATGAAAG TATCTTATTG GATAAGAGTA CCAGATTTTT AATCGTCGAT
GATAATATGC AAACCAGAAC TATTTTAAAG AGAATGCTTT TAAAATTCGG CTTTGAAGAT
ATAGCCTTGG TCAGCTCCGG AGAGCAGGCA ATAGGAGTTA TGAAAACAGC CGCCGAACAT
AAAAACCCCT TCAATGTGGT ATTCATAGAT ATGGTTATGC CTAAGATGGA CGGATGGCGC
CTCGGAGCCG AAATTCACAA TGACGATAGT CTTTCAGCCT CAAAACTATT TTTGATGATT
CCTGAAGGCA GCCTCGGAAG GGATGCCAAG ATGAAACTTT TAGAGTGGTT CGACGGCTAT
CTTTATAAGC CCTTAAAATC AAGAATAGTC TTTCATCTGC TAAACGAACT CTATCGTAAA
TTAGCAATAG CCTTAGAAAA AGATGACATT CCGGAATTGG AGCCGGTTGA AGCAGGAGGC
CAAGGTCAAC AAAATGGAAA TGTACATAAT TTCAATGAAG ATAACTTTTT CGGCTGTAAG
GTTTTAGTTG TAGACGATCA TCCCGTAAAC CAAAAATTAT TAAAAATTAT CTTGGAAAAA
GCTCACTGTA TTGTAAGCAC GGCAAATGAC GGAGAAGAAG CTATCGATAC GGCATCAAGC
GAACACTTTG ATATTATATT TATGGACATA CAGATGCCCG GTATAAACGG ATATGAGGCT
ACACAAATTT TGAGGGGAAA GGGATATTCA AGACCCATCA TCGCATGTAC TGCAGGATCT
CAAGACAATG AAAGAAACCT ATGTAAATCT ATGGGATTAA ACGATATAAT AAAAAAGCCC
TTTAACAAAA AACAGCTTTT TGAAATGGTA AAAAAACATT ATAAAAAGTA A
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| Protein sequence | MHLFNKSILN FKLGKYLTES NIAYIIFSPD YVPLFWSPEA ERLLPDYLIK NTKIRLQDYL
KTVLLEEDYI RLSAFIKSNP KTAAFEAKFD KPSSLSDKTA LKFSFTQQDD NNFFVTIDDI
TKQKLKERFL IIARQDAEKA NSMRSLFLAN VSHEIRTPIQ TIIGMMELIN ETNLDEEQSE
YTRQVNFSAE VLLTLVNDVL DFSKLESGNM TMERTVFNLT DSVEQTVDLI SMEAHKKGLE
IVVDISDKIP DFIYGDPARL QQVLLNFVKN AVKFTETGYV SVSVKLVFEN NSDDPYAAKH
FFILFEVADT GIGVNNEQKS KIFNSFYQGN AAINRKYGGT GLGLAISKNI ITMMKGQIGI
KDNIPRGSVF WFKIPLVPSK KKAPHESILL DKSTRFLIVD DNMQTRTILK RMLLKFGFED
IALVSSGEQA IGVMKTAAEH KNPFNVVFID MVMPKMDGWR LGAEIHNDDS LSASKLFLMI
PEGSLGRDAK MKLLEWFDGY LYKPLKSRIV FHLLNELYRK LAIALEKDDI PELEPVEAGG
QGQQNGNVHN FNEDNFFGCK VLVVDDHPVN QKLLKIILEK AHCIVSTAND GEEAIDTASS
EHFDIIFMDI QMPGINGYEA TQILRGKGYS RPIIACTAGS QDNERNLCKS MGLNDIIKKP
FNKKQLFEMV KKHYKK
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