Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE0473 |
Symbol | |
ID | 2740520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 528761 |
End bp | 530860 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637159345 |
Product | heavy metal translocating P-type ATPase |
Protein accession | NP_971087 |
Protein GI | 42525989 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT ATATTGCTCA CCGCCTCCCT GGGCGTTTGC GTTTAAGATA TAGCCGGAGA GGTTTAAGCC GCAAACAAGC CGTTCTTGTA GAGACTCTTG TGTCTTTGCA AGAAGGCATA AGATCGATAA GTGTAAATCC TGTTTCAGGA AGTATCTTAA TTGAATATTC GGGGATAAGC GAAGACGAAG CTCTTTCTTA TATAAAAGCT CTAAATTCTT CTTACCTTGA AAACGAAGAA CTGTTAGAAA ATGTAGAGGA ACCTATAGTG AGCGAAAGCT TAACGGTTTC TCTGGGGATG CTGCTTGCAG AGTTTTTTAT CCGCAGACTC TTACCTATTC CTGTCCGTAG AATACTGGCT CTCTTTTCAA TTATGCCCCG CGTAAAAGGC GGAATGAGAG CATTGAAAGG AGGCCGGCCT TTTTGTGCCG AAACCTTAGA TGCAACAGCT CTTTCTCTTT CTTATGCGAC GGGAGACCTA AACACAGCCG GAACCATCGC AATGATGCTT GAAATGGGTG AAATCTTGGA AGACTATACC CGCCGGAAGT CCTATGAAAA TTTAACCCGC AGTTTTTTAA ATACAAAAGA AACGGTTCAT GTTCTAAAAG ACGGAAATGA AACTGAAATT TCCGCCAATC TTCTTCAAGC CGGAGATACG GTTATTCTTA GGATAGGGTC GGTTATTCCT GCAGATGGAA CAGTCGTATC GGGCGAGGCT TCCGTTAATC AGGCTTCAAT GACGGGAGAA GGCCTTCCCG TGCACAAGGT TTCGGGAGAT ACTGTTTTTG CTTCTACCGT CGTTGAAGAG GGGGAAATCC ATGTATGCGT AAAGGCCTGC GGACGGGAAA CCAGAGTGAG CAAGATAGCC GATATGATTG ACCGCTCTCA ATCTTTAAAG GCGGCTTCAC AAATCAAATC CGAAAGGACT GCGGATAAAC TTGTTTTTTA TAACTTTTTA CTTGCAGGCT TGACCTACGC CTTTACCCGT AACTTTGCAA AGGCTGCCTC GACTCTTCTT GTCGACTATT CTTGTGCGAT GAAGTTATCA GCCCCTGTCT GCGTGCTCTC AGCCATGAAA AACTGTGCCG AGCACGGTAT TACCGTAAAG GGCGGAAAGT TTTTAGAAGA CTTTGCCCGG GCGGATACAA TCGTATTCGA TAAGACGGGA ACTCTTACGG AATCCCAGCC CTCTGTTAAA AAGATAATTA CCTTCGGCGG CAGGCCGGAA AAAGCCGTAT TAAAAATAGC GGCCTGTCTT GAAGAGCATT TTCCACATTC ACTTGCAAGG GCCGTTGTAC GGGAAGCCGA AAACAGGGGA ATTAAACACA GAGAAGAACA TACAAAAGTT TCCTATATTT TAGCCCATGG CCTTGCTTCT ACCTTAAAAG GAGAGGAGCT GCGTATAGGA AGTGCTCATT TTATATTCGA TGATGAGGGT ATTCCAAAAA CTGAAGAGGC CGAAAAAGCC ATTGAAGATT TGTCGAAGAG CGGCTGTTCC CAGTTATATT TATCGATAGG AAAAGAACTT GCCGGTATCA TTGCGATAGA AGATCCTGTT CGCTCTGAGG CAAAAGAAGT TGTTTCAGAG CTTCACAAAC TGGGAATAAA AAACATAATT ATGCTGACAG GGGACGGCCC CCAAACCGCA CGCAGTATAG CCGAAAAGAC GGGTATCGAC CGTTATCATG CTCAAGCTCT TCCCGATACA AAGGCCGATT TTATTAAAGA GTTAAAAGCG GAGGGTAAAA AAATCGTCAT GATAGGCGAC GGGATAAATG ATTCCCCTGC TCTGTCGGAA GCGGATGTAG GAATTGCGAT GGGACAGGCT TCTTCGATAG CAGGAGAAAC CGCCGATATT CTTTTGCCGG ATGACGGCCT AAGGGCCCTA CCCATTTTAA GGCGTATAGC AACGGGCTTG ATCAAAAGAA TCAATGTAAA CAATAAGGCG ATTATCGGCA TTAACTCAGC CCTTATTGCA GGGGAACTTG CGGGCTCAAT TCCTCCGGCT ACAGCGGCCT TAGTCCATAA CGGTTCGACG GTTGCCATAG GTATGTCTGC AATGAGAAGC TATGAGCAGC CCCTTGCCGA ATCTATTTAA
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Protein sequence | MNFYIAHRLP GRLRLRYSRR GLSRKQAVLV ETLVSLQEGI RSISVNPVSG SILIEYSGIS EDEALSYIKA LNSSYLENEE LLENVEEPIV SESLTVSLGM LLAEFFIRRL LPIPVRRILA LFSIMPRVKG GMRALKGGRP FCAETLDATA LSLSYATGDL NTAGTIAMML EMGEILEDYT RRKSYENLTR SFLNTKETVH VLKDGNETEI SANLLQAGDT VILRIGSVIP ADGTVVSGEA SVNQASMTGE GLPVHKVSGD TVFASTVVEE GEIHVCVKAC GRETRVSKIA DMIDRSQSLK AASQIKSERT ADKLVFYNFL LAGLTYAFTR NFAKAASTLL VDYSCAMKLS APVCVLSAMK NCAEHGITVK GGKFLEDFAR ADTIVFDKTG TLTESQPSVK KIITFGGRPE KAVLKIAACL EEHFPHSLAR AVVREAENRG IKHREEHTKV SYILAHGLAS TLKGEELRIG SAHFIFDDEG IPKTEEAEKA IEDLSKSGCS QLYLSIGKEL AGIIAIEDPV RSEAKEVVSE LHKLGIKNII MLTGDGPQTA RSIAEKTGID RYHAQALPDT KADFIKELKA EGKKIVMIGD GINDSPALSE ADVGIAMGQA SSIAGETADI LLPDDGLRAL PILRRIATGL IKRINVNNKA IIGINSALIA GELAGSIPPA TAALVHNGST VAIGMSAMRS YEQPLAESI
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