| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0089 |
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| Symbol | |
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| ID | 2741704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 106965 |
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| End bp | 108644 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637158959 |
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| Product | transglutaminase-like domain-containing protein |
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| Protein accession | NP_970706 |
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| Protein GI | 42525608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.890892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA GATTTACTTA TTTATTTAGA AAATATTTTG TTTTTAGGTT TTTTGTATTC
CTCCTTCTTT TCTGCGGTCT TGCGGCTCTT ATTTTTTATT TAACATCTTT GACTGCTAAA
TATCCTTTGA TAACCGAAAT TAGTCCCCCG ATTGCTCAAG CCGGTGATGA AATTGTAATA
ACCGGAGAGC ATTTTGGAAA CGAAGTAGAC TCCTCATGGA TTGAAATCGG AGATGCTATC
ATTCAAGCGG AAAATTGTAC TGTCTGGACA GATAAAAAAA TTGTTTTTAA GTATCCTGAA
TATCAAAACG GCGGCATAGT ATATGTTGTT GTACAAAATA AAAAATCTTT GCCTTCATTT
ATGGCTTCAG TTGAATCAAT GCCTGTAATA AAAGATAAGG CTCATTCGGG CGGAATTCCT
TCAATAATTG CTTTAAACAA GGATTTTGCC GAGGTAGGAA GCATTATAAA AATTTCAGGT
GAAAATTTTG GGGAGACAAG GGGAAGCTCC CAAGTTTTGT TTGTATCCGA TTTTAATGCT
TCAATGATTG AACAAGTTGA AAAAAAAGAA GAGATAGAGG CTGCCCGTTG TTCGGACTAT
GATTACGATT TTGTGTTTTG GTCAAATCAG GAGCTTCACG TAAGGGTTCC GGATGGAGCG
GATTCCGGAA TGCTTTTGGT TGTAACGTCT TCCGGAGCCA GCAACTCTGT TCCTTTTAGA
GTCAAAAACA AGATAGGTAC AAAGACTTAT TCAAACAAAA AGAATTTTAC AATTGCTGCC
GAGGTTGATA TTTCAAATGT AGAGGCTGTA GAAAAAAATT CTCTTTTTAT AAAGGTTCCG
CTTCCGATTC AATCCTATTC GCAGAGAGAT GTTAAGGTTT TGTCTATTAA TCCCACTCCT
TTTGTAGCCG ATTATCAGGG GGCTGCCATC CATCAGTATG AAAATATAAA TTCTTCTACA
AAAATTCACA TAAGACAAGA GTATGGCGTA AACACCTATG AGGTAAATAC AAGGATTAAT
CCCGTTAATG TAAGAGTTAA CTCCCGTCAA AACAAGGCTA TCTATGATAA TTATGCTATT
GCTACCGAGT TAATTCCGGC GAATGATCCT CTTATTCAAA AAACGGCAGC CGAAATTGTT
CAAAATGAAA GAAACCCTTA TAACAAGGCA AGACGCATAT ATAATTATTT ATTAAAAAAT
GTCGAAATAA TTCCGGCTTC AATATTGAAT TCCGGGGCTT CGCCTGTAAA TGCATTAAAA
GAAAAAAAGG CCGATACCTA CGATATAGCT ATTTTGTTTG CGGCTCTTGC AAGAGCTGCC
GGTATACCCG CTCAGCCTAT TGCCGGAATC ATTGCAGATG TTTCTCAAAC AAGTTATCTT
CACTGGTGGG CAGAGTTTTA TCTGGAAGGC TTCGGATGGA TACCTGTAGA CCTCGGTTTA
GCAAAGTCAG TTCCCTTCGA TATGGGTGTT TCTCAAAGTG AAGGCTGGTA CTTCGGTAAT
TTGGATGCTT TTAGGGTCGC ATTTTCCCGA GGTGAGAATA TTCAGCCGCC GATGGCATCT
AACAGTACAA TGGTATCAAA AGAAAGAAGT TATGCCTTTT ATAACGGCTG GGAAGAGTAT
TCCGGTCTTA CAAAATATAA TTCCGTTTGG AGAATTCCGA ACGTAATCGC TATTTACTAA
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| Protein sequence | MGNRFTYLFR KYFVFRFFVF LLLFCGLAAL IFYLTSLTAK YPLITEISPP IAQAGDEIVI
TGEHFGNEVD SSWIEIGDAI IQAENCTVWT DKKIVFKYPE YQNGGIVYVV VQNKKSLPSF
MASVESMPVI KDKAHSGGIP SIIALNKDFA EVGSIIKISG ENFGETRGSS QVLFVSDFNA
SMIEQVEKKE EIEAARCSDY DYDFVFWSNQ ELHVRVPDGA DSGMLLVVTS SGASNSVPFR
VKNKIGTKTY SNKKNFTIAA EVDISNVEAV EKNSLFIKVP LPIQSYSQRD VKVLSINPTP
FVADYQGAAI HQYENINSST KIHIRQEYGV NTYEVNTRIN PVNVRVNSRQ NKAIYDNYAI
ATELIPANDP LIQKTAAEIV QNERNPYNKA RRIYNYLLKN VEIIPASILN SGASPVNALK
EKKADTYDIA ILFAALARAA GIPAQPIAGI IADVSQTSYL HWWAEFYLEG FGWIPVDLGL
AKSVPFDMGV SQSEGWYFGN LDAFRVAFSR GENIQPPMAS NSTMVSKERS YAFYNGWEEY
SGLTKYNSVW RIPNVIAIY
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