| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1036 |
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| Symbol | uvrA-1 |
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| ID | 2553083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1098576 |
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| End bp | 1101479 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637149741 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | NP_905256 |
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| Protein GI | 34540777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000712855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACGATA CAGTTATAAA CGTAAAAGAC AAGATAGCTC GACACGATGC TGTCGAAGTC
TATGGAGCAC GGGTGCACAA TCTGAAGAAT ATCGATGTGT GCATTCCGCG TCATAGCCTT
ACAGTCATCA CTGGAATGAG TGGTAGCGGA AAGTCGTCAT TGGCTTTCGA TACCCTTTTT
GCCGAAGGAC AGCGACGGTA CATAGAAACT TTTTCGGCTT ATGCGCGGAA TTTCCTCGGT
GGTGGTATGG AGCGCCCCGA CGTGGACGAG ATAAAAGGGC TGAGTCCGGT CATTTCCATA
GAACAGAAGA CGACCAATCG GAATCCGAGA TCGACTGTCG GTACCGTTAC AGAGGTGTAC
GACTTCTTTC GTTTGCTCTA TGCTCGTGTT GCTGAGGCTT ATTCTTATGC CGGAGGAAAG
AAGATGGTGA AATACACCGA GGAGCAAATC TTCCACCTCA TTTTGGAAAA GTATGATGGC
CGTAAGATAG CTTTGTTAGC CCCGGTGGTT CGCTCGCGTA AGGGGCATTA TAAGGAGCTA
TTCGAAAGGC TTCGTAAGAA AGGCTATCTG CACGTACGCG TGGATGGTGA GATTCGCGAG
ATTTTGCATG GGATGAAGCT TGATCGCTAT AAAATGCATG ACGTCGAAGT GCAGATCGAC
AAGCTGTGCG TAGCATCGAA TCAAAGCAAA CGTATAGCGG AGAGCTTGGC ACTGGCTATG
CGTGAAGGCG AAGGGCTTGT GATGGTGTTG GATTCGGAAA AAAACGAAGT GGGACATTTT
AGTCGGATGA TGATGTGTCC TGATACGGGA ATTTCGTATA GCGATCCGGC TCCGCACAAT
TTCAGTTTCA ATTCCCCTCA TGGCTATTGT CCGCGCTGTA AGGGCTTGGG CGAAGTGAAT
CTGCCGGATA TGGACAAGAT CATTCCATCT CGTGAGAAGA GTATATACGA AGGTGGCATT
GAGCCATTGG GCAAATACAA AAACAATCTT TTCTTTTGGC AAATAGAGGC ATTGTGCGAG
AAGTACGATG TGACGATCAA AACGCCTTTG CGCGATTTGC CGGAAGAGTT GATCGAGGAT
ATCCTATATG GTACAGACGA ACTACTGACC ATAAACAACA AAGCTTTGGG GCAGTCGAGG
TATGCTCTCA GCTTCGATGG CGTGGCTAAG TATATATTGA TGCAGGCAGA AGAATCGGAT
GCTTCGGCTA CTGCGCAGAA ATGGGCAGAT CAGTTTCTCA AGACTACAAC TTGCCCCGAC
TGTGCCGGCA AGCGTCTGAA CAAAGAAGCT CTGTCCTATC GTTTGGCCGG CAAGGACATT
GCAGAAGTGA ATGCAATGGA CATCAAGACT CTTATTGAAT GGGTAGATTC TCTGGATGAA
CATCTGTTGG ATACGCAACG GGCTATTTCT ATAGAAATAC TGAAAGAGAT ACGGACACGC
TTGGGGTTTC TTAAAGATGT GGGGTTGGAG TACTTGACGA TGAACCGAGC TGCAGCATCC
TTATCCGGAG GAGAAAGCCA GCGTATTCGT TTGGCTACGC AGATCGGGAG CAAACTGGTT
GAGGTCTTGT ACATATTGGA TGAACCGAGT ATCGGTCTTC ACCAAAGGGA CAATCTTCGG
TTGATTCATT CGCTTCAGGA TTTGCGTGAT ATAGGCAATA CAGTGGTAGT GGTGGAGCAT
GATCAGGATA TGATGCTGCA CGCCGACTAT GTAATAGACT TAGGACCACG AGCCGGCAGA
CATGGTGGTG AAGTGGTGTT TGCAGGTAGT CCGGAAGAGA TGGTGCAGGC TAATACCCTG
ACTGCCGATT ATATAAGTGG ACGAAAGCGT ATAGAAAAGT CGATCGGCAG GAGAGATGGT
AGTGGGAAAA CGATAAAATT ATTTGGAGCC AAAGGCAATA ACCTGCAGAA TATAGACGTT
ATCTTTCCGC TGGGGGTATT TATATGTGTT ACCGGGGTCT CCGGTAGTGG GAAAAGTACA
TTGATCAATA AGACTCTATT CCCTGCTATC AGCCAAAAGC TGTACCGCTC TTTGCAGGAT
CCGATGCCCT ACGACCGCAT AGAGGGGTTA AAGCATATAG ATAAGATAAT AGCCGTAGAC
CAAAGTCCTA TCGGGCGGAC GCTTAGAAGC AATGCAGCCA CATATACGGG ATTGTTTACC
GATATTCGCG CTCTTTTTGT CGGTCTGCCC GAGAGTAAAG CTCGTGGATA TAAGCCGGGG
CGTTTTTCTT TCAACGTCAA AGGCGGACGC TGTGAGGTTT GTAAGGGTAA TGGCTACAAG
ACGATCGAAA TGAATTTTTT GCCCGATGTA TTTGCTCCGT GTGAGGGATG CCGGGGAAAG
CGATACAACA GGGAGACACT CGAAGTCCGT TACAAAGGAA AATCCATTGC GGATGTTTTG
GATATGACTA TCAATAAGGC TGTCGAATTT TTCGAACATG CACCTCATAT TTTATCCAAG
CTTTCCGTTT TACAGGAGGT CGGTTTGGGC TATATCAAAC TGGGACAACC ATCCTCGACT
TTGTCGGGAG GAGAGTGTCA ACGTGTTAAA TTAGCCACCG AGCTGAGTAA ACGTGACACG
GGAAATACAC TCTATGTATT AGATGAACCG ACTACGGGCT TACATTTCGA AGATGTACGC
GTTTTGTTGG GGATCCTTAA TCGACTGATA GAGAGAGGGA ATACGGTAAT AGTGATCGAA
CATAATTTGG ATGTGATCCG CTGTGCGGAT TATTTGATTG ATATAGGACC GGAGGGAGGA
GCAGGTGGCG GACAGTTGCT TTACCAAGGG AAAATGGAGG ATATAATAGA ATGCAAGAAT
AGTTATACAG CTCAATTTGT GAAAGCCGAA CTCGAAAAAG GCCGGATTGA TACTGTACAC
ATGAATTCTG CAGACAATAT ATAA
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| Protein sequence | MHDTVINVKD KIARHDAVEV YGARVHNLKN IDVCIPRHSL TVITGMSGSG KSSLAFDTLF
AEGQRRYIET FSAYARNFLG GGMERPDVDE IKGLSPVISI EQKTTNRNPR STVGTVTEVY
DFFRLLYARV AEAYSYAGGK KMVKYTEEQI FHLILEKYDG RKIALLAPVV RSRKGHYKEL
FERLRKKGYL HVRVDGEIRE ILHGMKLDRY KMHDVEVQID KLCVASNQSK RIAESLALAM
REGEGLVMVL DSEKNEVGHF SRMMMCPDTG ISYSDPAPHN FSFNSPHGYC PRCKGLGEVN
LPDMDKIIPS REKSIYEGGI EPLGKYKNNL FFWQIEALCE KYDVTIKTPL RDLPEELIED
ILYGTDELLT INNKALGQSR YALSFDGVAK YILMQAEESD ASATAQKWAD QFLKTTTCPD
CAGKRLNKEA LSYRLAGKDI AEVNAMDIKT LIEWVDSLDE HLLDTQRAIS IEILKEIRTR
LGFLKDVGLE YLTMNRAAAS LSGGESQRIR LATQIGSKLV EVLYILDEPS IGLHQRDNLR
LIHSLQDLRD IGNTVVVVEH DQDMMLHADY VIDLGPRAGR HGGEVVFAGS PEEMVQANTL
TADYISGRKR IEKSIGRRDG SGKTIKLFGA KGNNLQNIDV IFPLGVFICV TGVSGSGKST
LINKTLFPAI SQKLYRSLQD PMPYDRIEGL KHIDKIIAVD QSPIGRTLRS NAATYTGLFT
DIRALFVGLP ESKARGYKPG RFSFNVKGGR CEVCKGNGYK TIEMNFLPDV FAPCEGCRGK
RYNRETLEVR YKGKSIADVL DMTINKAVEF FEHAPHILSK LSVLQEVGLG YIKLGQPSST
LSGGECQRVK LATELSKRDT GNTLYVLDEP TTGLHFEDVR VLLGILNRLI ERGNTVIVIE
HNLDVIRCAD YLIDIGPEGG AGGGQLLYQG KMEDIIECKN SYTAQFVKAE LEKGRIDTVH
MNSADNI
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