Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4988 |
Symbol | |
ID | 1042467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5681943 |
End bp | 5686883 |
Gene Length | 4941 bp |
Protein Length | 1646 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148388 |
Product | CheA signal transduction histidine kinase |
Protein accession | NP_747090 |
Protein GI | 26991665 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.4615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTG CCGTAAGCCC CGAGCGTCAC GAAACAGTGG CGCTGGCCTG GACCAAGGCC GCCATCCTCG ATTGCCTGGG CCAGGCACGG CAGGCGCTGG AGCGCTTTGC CGGCGAGACG GGAGACCTGT CGATGATGGC TTTCGTGGTC GACAACCTGC ACCAGGTGCA CGGCTGCCTG CGCATGCTCG AACTGCGCGG CGCGACGCGC CTGGCGGAGG AGCTGGAGCT GTTTGCCAGG GCGTTGGCCG ACGGCCAGGT CAGCCCCCGG GGTGATTGCC TGGGTGCATT GTTCCGCGGC CTGGAGCAGT TGCCCTCGTA CCTGGAGCGG TTGCGCGGTG CTCGCCATGA CCTGCCACTG GTGATGCTGC CGTTGCTCAA CCAGCTGCGC GCCTGCCGGG GGGAGGAACC GCTGGCTCAG GCCAGCCTGA TGACCGGCGC CGCCCAACGC TTTGCGGGTG ACGATGACCT TGCCAACCTC GACCTGTCGC TGGGCAACTG GCGTGACCAA CTGCAGGCCG GGTCGGGGCG CGATGCGCTG CGTTCGGTGG TGACTGCACT GTGCGATGAC TTGATGCGCA TCAAGGAGCG CCTGGACCAG TTCGGGCGCG GCGACCGTCA GCACCGCGAA CAGCTCGATG CGCTGTTGGC GCCGTTGCGC CACGTGGCTG ACACCCTGGC GGTACTGGGC TTTCAGCAAC CGCGGCGGGT GATCATCGAC CAGGTGCTGG CGTTGCAGGC ATTGGCTCAG GGCGAGCGGG CGGTGGACGA CGCGGTGTTG ATGGATGTGG CGGGGGCTCT GTTGTACGTG GAAGCCTCCC TGAACGGCAT GGTCGGCCCT TTGGAGGAAA ACGGCCAAGG CAGCCTGCCG GGCTCGGACC TGGCCGAGAT ACGCCAGCTG GTGCTGAATG AATCGCTGAA CGTGTTGCAG CAGGCCAAGG ATCTGATCGG CGATTACCTG GAGTCCGACT GGCCCCGGCA ACGCCTGCAG CCCTTGCCGG GGCTGTTGCA GCAGATCCGC GGGGCATTGG CCATGTTGAT GCTGCCGGCC GTGGCCGAGC TGTTTGTCGG CTGCGCAAGC TATGTGCAGC GTTGGTTGCA GCACCTGGAG GAAGAGCCGC CGATTGATGA GCTGACGCAC TTGGCCGAGG CACTGAGCGC TGCCGAATGC TACCTGCAAT GGCGGGCGGC AGACCCGCTG GCCGATGGCC AACCCTTTAT CGAGATGGCA CGGGCCAGCC TGGCGGCGCT GGGTGTGCAG TGCGTGGTGG TCGGGGCCAG CCCAGACCAG GACGGCAATG GCGATGGCAT CGATGATGAG CTTCGCCAAG TGTTCCTTGA CGAGGCGGGC GAACTGCTGC CGGAAATCGA GCGCCACTGG CTGCGCTGGC GTGCCGACAA CCAGCAGCGC GAGGCACTGG GTGAAGTGCG TCGCGCGCTG CATACACTCA AAGGCAGCGG CCGCATGGTC CATGCCGAGG CGGTGGCTGA ACTGGCCTGG GGCGCCGAGC ACCTGCTGAA CCGGGTGCTC GAGGGCCGCA GCGTGCTCAG TCCGGAAGGG GTTGTAGCGC TGCAGCAGGT GTTCGTTCAC CTGCCTGACC TGCTGGCCGA CTTTGCCGCC GGCCAGTTGC CGCAACTGAC TGAAATCGAG CAATTGGCCG GGCATCTGCA CAGCCTGGCC GAAAACGATG CCCCGGCGGC TGCCGGTGTC GATGGCCTCG ATCCGCAGTT GCTGGGCATT TTTCGCAGCG AGGCGCAGGG CCATCTGGCC AGCCTTGAGG TTTATCTGCA AAGCACCGGC GGCCACGACA CGCCGGTCAG CGATGACTTG CAGCGTGCCT TGCACACACT CAAAGGCAGT GCCGCCATGG CCGGTGTGAT GCCGGTGGCC GAACTGGCCA CTGCCTTCGA CCGCCTGGCC CGTGAGTACA AGGGCCATCA ACTGCCACTG CAAATGGCCG AAATGGAATG GCTGGAGGCT GCGCGGTCGT TGTTCCATCT GGGCTTGGCG CAACTCGATA GCACGCCCCT GGCCGCCATC CCCGGTGCCG CGGAACTGAT CGAGCAGGTT GGCCAGGCCG TGGACCGCCG CCTGGCCAGC CTGCATGAAG ACCCGCACCA TGCCGGCCGC AGCAAGCGTG ATCCGCAGTT GGTCGCCAGC TTCCTGGCCC ATGCCATGGA CATCCTGCTC GATGCAGAGA CGTTGTTGTC GCGCTGGCAG CAACAGCCCG GCCAGCGTGA CGCTCTGGAT AACCTGCTCG ACCAGATGAC CACCCTGGGG CACGCTGCGC ACCTGGCCGA CCTGTGGCAG ATGGATGACG TGTGCGAGGC GTTGCTGGAC CTGTATGGCG CTGTGGAGGA GGGCAGCCTG CCTGCCGATG CCCGCTTCTT CAGCCAGGCG CAGCGGGCCC ATGAAGCCTT GCTGGACATG CTGGACGAAG TGGCGGCCGG GCAGGATATT CCACCGCGCC CGGAGCTGGT CGACCGTCTG CGCAACCTGC TGGACCAGGC CCTGGCGCCA GATGCCACCG GCCTGGTGGG CATCGATACG GTCACACCAC TGCACCCGGA CATGGACCTA TCCGATACCT TGGGGTTGCC ACGCCCGCCG TTGCAGCCGC AGGTGGCCGA GCCGCTTGCC GAGGAGCCGG AAAGCCCCGG CGAAGAGCTG CTGGAAGTGT TCCTGGAAGA AAGCTCGGAC ATCGTCGAGA GCGCCGCGGC GGCCCTGGCG CGCTGGCAGG CCGACCCGCG CAGCAGCGTC GAGGTGGACA ACCTGATGCG CGACCTGCAC ACCCTCAAAG GCGTGGCGCG CATGGTCGAA ATCACCCCGA TCGGCGACCT GGCCCACGAA CTGGAGTTCC TCTACGAGCT GTTGGCTGCG GGTAGATTGC CGCCAAGTGC GCCACTGTTC GCACTGCTGC AGAACTGCCA CGACCGGCTG GCGCATATGC TTGACGCTGT GCGTCTGGGG CAGCCGCTGC ATGCCGCTAC AGCGCTGATC GACTACATTC GCAACTTCAG CAGTGCCGCA CTGACAGACA GTGCCGCGGG CCAGGGGCCG CCAGAAGCTG CCACCGCCGA AATACCGGCA GCAGCGCCAG AGCGGGCACC GGGTGACATG GTCAAGGTCG ACGCCGAGCT GCTCGACGAC CTGGGTAACC TGGCAGGCGA GCACTCGATC ATCCGGGGGC GCATCGAGCA ACAGGTCAAC GACGCGCAGT TCGCCCTCAA CGAGATGGAG ACCACACTCG AGCGCATGCG TGATCAGTTG CTGCGTCTGG ATGTCGAGAC CCAGGGGCGA ATCTCCAGCC GGCAGCAGTT CGAAGGCGAT GCCTATGACG ACTTCGACCC GCTGGAAATG GACCGCCACT CCCAGCTGCA GCAGCTGTCA CGGGCCCTCT TCGAGTCTGC CTCGGACCTG CTCGACCTGA AGGAGACCCT GGCTCAGCGC GCTCAGGAGG CCTACAGCCT GCTGCAACAG CAGGCGCGGG TGAACAGCCA GTTGCAGGAG GGCCTGACGG CCACCCTGAT GGTGCCGTTC GAGCGCCTGG TGCCGCGCTT GCAGCGCGTG GTGCGGCAAG TGGCCAGCGA GCTGGGCAAG CAGGTGGAAC TGGTGGTTGG CAATGCCGAG GGCGAACTGG ACCGCAGCGT GCTGGAACGT ATGGTGGCGC CGCTGGAGCA TATGCTGCGC AACGCCGTTG ACCACGGCCT GGAAAGCCGC GCAATGCGCC TGGCCGCCGG CAAGCCGGAG CAGGGCACCA TTCACCTGAA TTTGCTGCAT GAGGGCGCCG ATATCGTCAT CGAAATGACG GATGATGGTG CCGGCGTGCC CCTGGAGGCG GTGCGGCGCA AGGCCATCAA GCGCGGCCTG CTGGACCCGC AGGCGCAGTT GAGTGACCAC GAGATCCTGC AGTTCATCCT GCGGCCAGGC TTTTCCACCG CCGAAAAGAT CACCCAGATT TCCGGGCGCG GGCTGGGCAT GGATGTGGTG CACGAGGAGG TCAAGCAACT GGGTGGCTCG ATGAGTATCG AGTCGGCGCA GGGCAAGGGG GCGCGTTTCC TGATCCGCCT GCCGTTCACC GTGTCGATCA ACCGTGCGCT GATGGTGCAC CTGGGCGAAG AGCAATACGC CATTCCGCTC AATACCATCG AGGGCATCGT CCGCGTGCCA CCTGCCGAGC TTGCGGCGTG CTACCAGCTG GACTCGCCGC GCTATGTCTA TGCCGGCCAC GAATACGAGC TGCGCTACCT GGGCGAGTTG CTGCAAGGCC TGCCGCGCCC CGCGCTGCTG GGGCAGAGCG TGCCGTTGCC GGTGCTGCTG GTGCATTCCA AGGAGCAGTC GTTCGCCATC CAGGCCGACA GCCTGTCGCC CAGCCGCGAG ATCGTGGTGA AAAGCCTGGG GCCGCAGTTT GCCGCGGTTG CCGGGTTATC GGGGGCGACA CTGCTGGGCG ATGGCCGGGT GGTGCTGATT CTTGACCTGC TGGGCCAGCT GCGCGGCCAG CAGCGACGGC TGGCCCGCTT GCCTGGTGGC GGTAGCCAAC GCCAGTTGCT TGGCCCGGCG CCGCGCCGTG CCTTGCTGGT GATGGTGGTG GACGATTCGG TAACCGTACG CAAGGTAACC AGCCGCCTGC TGGAGCGCCA CGGCATGAGC GTGCTTACGG CCAAGGATGG TGTAGATGCC ATGGCCCTGC TGGAAGAGCA CCGGCCCGAC GTGTTGTTGC TGGACATCGA AATGCCGCGC ATGGACGGCT TCGAGGTGGC CACACGCATC CGCCGTGACG CACGGCTGAA AGACTTGCCG ATCATCATGA TCACCTCGCG TACCGGGCAG AAGCACCGGG ACCGCGCCAT GGCCATCGGC GTCAACGAAT ACCTGGGCAA GCCGTACCAG GAATCGCTGC TGTTGCAGAG CATCGCCCAT TGGAGCCAGG CCCATGCTTG A
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Protein sequence | MASAVSPERH ETVALAWTKA AILDCLGQAR QALERFAGET GDLSMMAFVV DNLHQVHGCL RMLELRGATR LAEELELFAR ALADGQVSPR GDCLGALFRG LEQLPSYLER LRGARHDLPL VMLPLLNQLR ACRGEEPLAQ ASLMTGAAQR FAGDDDLANL DLSLGNWRDQ LQAGSGRDAL RSVVTALCDD LMRIKERLDQ FGRGDRQHRE QLDALLAPLR HVADTLAVLG FQQPRRVIID QVLALQALAQ GERAVDDAVL MDVAGALLYV EASLNGMVGP LEENGQGSLP GSDLAEIRQL VLNESLNVLQ QAKDLIGDYL ESDWPRQRLQ PLPGLLQQIR GALAMLMLPA VAELFVGCAS YVQRWLQHLE EEPPIDELTH LAEALSAAEC YLQWRAADPL ADGQPFIEMA RASLAALGVQ CVVVGASPDQ DGNGDGIDDE LRQVFLDEAG ELLPEIERHW LRWRADNQQR EALGEVRRAL HTLKGSGRMV HAEAVAELAW GAEHLLNRVL EGRSVLSPEG VVALQQVFVH LPDLLADFAA GQLPQLTEIE QLAGHLHSLA ENDAPAAAGV DGLDPQLLGI FRSEAQGHLA SLEVYLQSTG GHDTPVSDDL QRALHTLKGS AAMAGVMPVA ELATAFDRLA REYKGHQLPL QMAEMEWLEA ARSLFHLGLA QLDSTPLAAI PGAAELIEQV GQAVDRRLAS LHEDPHHAGR SKRDPQLVAS FLAHAMDILL DAETLLSRWQ QQPGQRDALD NLLDQMTTLG HAAHLADLWQ MDDVCEALLD LYGAVEEGSL PADARFFSQA QRAHEALLDM LDEVAAGQDI PPRPELVDRL RNLLDQALAP DATGLVGIDT VTPLHPDMDL SDTLGLPRPP LQPQVAEPLA EEPESPGEEL LEVFLEESSD IVESAAAALA RWQADPRSSV EVDNLMRDLH TLKGVARMVE ITPIGDLAHE LEFLYELLAA GRLPPSAPLF ALLQNCHDRL AHMLDAVRLG QPLHAATALI DYIRNFSSAA LTDSAAGQGP PEAATAEIPA AAPERAPGDM VKVDAELLDD LGNLAGEHSI IRGRIEQQVN DAQFALNEME TTLERMRDQL LRLDVETQGR ISSRQQFEGD AYDDFDPLEM DRHSQLQQLS RALFESASDL LDLKETLAQR AQEAYSLLQQ QARVNSQLQE GLTATLMVPF ERLVPRLQRV VRQVASELGK QVELVVGNAE GELDRSVLER MVAPLEHMLR NAVDHGLESR AMRLAAGKPE QGTIHLNLLH EGADIVIEMT DDGAGVPLEA VRRKAIKRGL LDPQAQLSDH EILQFILRPG FSTAEKITQI SGRGLGMDVV HEEVKQLGGS MSIESAQGKG ARFLIRLPFT VSINRALMVH LGEEQYAIPL NTIEGIVRVP PAELAACYQL DSPRYVYAGH EYELRYLGEL LQGLPRPALL GQSVPLPVLL VHSKEQSFAI QADSLSPSRE IVVKSLGPQF AAVAGLSGAT LLGDGRVVLI LDLLGQLRGQ QRRLARLPGG GSQRQLLGPA PRRALLVMVV DDSVTVRKVT SRLLERHGMS VLTAKDGVDA MALLEEHRPD VLLLDIEMPR MDGFEVATRI RRDARLKDLP IIMITSRTGQ KHRDRAMAIG VNEYLGKPYQ ESLLLQSIAH WSQAHA
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