Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4610 |
Symbol | |
ID | 1042401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5231116 |
End bp | 5233041 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148008 |
Product | PepSY-associated TM helix domain protein |
Protein accession | NP_746719 |
Protein GI | 26991294 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAATCAT TAGTATTGCA ACCCCGAAAA CGCCCGGACC TTCGCCATGA CGCGCAAAAC CGCCGGCCTC CCGTTCAGTT ACCGGCTGGG CGTTGCCTCA CGCAGCCTGG CCGCGCTGCT GGGCGGCTAC TTGCTGGCGT CGATGGCCAG TGTCTGTATT GCCTTGCTGG CGCCGTTGCC AAAGGTCGAT GCCACGCTCA CCGGCCTGCT GCTGTCGTTC GTCTTCTACC TGCTGGCGTT CATCTGGTGT TTCGCCTGCC GCAGCGCCTG GCGTGCCTGG TTGGGCGTAT TGGCGCCAAG CCTGCTGCTG GGCGTGATCA GCGGCGTTGC CTACTGGATG AAAAACGCAT GAAAGAAGGC TTCCGCCAGG CCATGGCCTG GCTGCACACC TGGACCGGCC TGATCTTCGG CTGGCTGTTG TTCGCCATCT TCCTTACCGG CACGCTGTCG TACTTCAAGG AAGAAATCAC TCATTGGTCG CAACCTGAAG TGCGCAGCCA TGCCCTGGAC CCGATCAATA GCCTGGCGGT CGCTCAACGT TACCTGCAGG ACAATGCAGG GCATTCGAGT ACCTGGTTCA TTCGCATGCC GAACGAACGG GAGGCCGCCT TGAGTGTGGG GTACCGCGAC CCCAGTGGCG GCCCGCGTGG CTTCGTCAGG AAAACCCTCG ATACCCAGAC CGGCCAGCCG GTGGAAGCAC GTGACAGCCG CGGTGGTGAG TTCTTCTACC GCTTTCACTT CCAGCTTCAG ATGCCTTACC CGGTTGGCCG TTGGCTCTCG ACGTTCTGCG CTTTCATCAT GCTGCTGGGG TTGGTCACCG GCATCATTAC CCACAAGAAG ATCTTCAAGG AGTTCTTCAC CTTCCGCCCT GGCAAGGGGC AGCGTTCCTG GCTGGACGGG CACAATGCCA TCGGCGTGCT GGTGCTGCCG TTTCACCTGA TGATCAGCTA CAGCAGCCTG GTGCTGTTCA TGTACATGGT GATGCCGGCG GGCATCATGG CCAGCTACGG CAATGACACC GACAAGTACT TCAACGACCT GTTTGGCCGC AACGATGCGC CCAAGGCGGC CCAGGTGGCC ACGCCGCTGG TAGCGCTGCC GAGCCTGTAC GCCAAGGTGC AGGAGCTGCA GCCGGGGGCG CGTGTCGGCA ACATCCAGGT GCAGAACCCG GGCGACAGCA ATGCCCGCGT TACCTTCACC CAATCGGCAG CCGACCACGT GGCTTATCGG CGTAGCGCCA ACTGGACATT CGATGGGGCC AGTGGTGCGC TGTTGAGCCA GGGCAAGCCA GAGAGCGGGG TAATGATGAC CGCCTTCAGT TTCGCCGGCC TGCACATGGG TAACTTTGCC GGGCCTTGGC TGCGCTGGCT GTACTTCTTC TTTGGCGTGG CCGGTACTGC GGTGATTGGT ACCGGGTTGG TGATGTGGTT GGGCAAGCGC CAGCTCAAGC ACGCCAAGAA CGGGCATATG CCAGGTGAGC TGCGTTTGGT CGAAGTGCTC AATATTGCCA GCATGAGCGG CTTGTTGCTG GCGGTGGCGA GCTTCTTCTG GGCCAACCGC CTGGTGCCCA TGGCTGTCGA AGGCCGCGCC GACTGGGAGG TCAATGCTTT CTTCATCGCC TGGGGCCTGT CGCTGGTGCA CGCCGTGCTG CGTAGCGGGC GCAAGGCCTG GGGCGAGCAA CTGGCGCTGG GGGCGCTGGC CTTCGCGCTG CTGCCGTTGC TCAATGGCCT GACGACTGAC CGGGGCTTGA ACCATTCGGT ACTGGAGGGC GACTGGGCCA TGGCCGGCTT CGATCTGACA GCCCTGGGGA CCGGCCTGTT TCTGGCCTGG CTGGCTCGCA AGATGCTGGT CAGCCCCACG CCCGTAGCCA AGCGCGCGGC ACGTGCGGCA AAAAAACCGA GCATTGAAAC GTTGGGGGCG AGCTGA
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Protein sequence | MKSLVLQPRK RPDLRHDAQN RRPPVQLPAG RCLTQPGRAA GRLLAGVDGQ CLYCLAGAVA KGRCHAHRPA AVVRLLPAGV HLVFRLPQRL ACLVGRIGAK PAAGRDQRRC LLDEKRMKEG FRQAMAWLHT WTGLIFGWLL FAIFLTGTLS YFKEEITHWS QPEVRSHALD PINSLAVAQR YLQDNAGHSS TWFIRMPNER EAALSVGYRD PSGGPRGFVR KTLDTQTGQP VEARDSRGGE FFYRFHFQLQ MPYPVGRWLS TFCAFIMLLG LVTGIITHKK IFKEFFTFRP GKGQRSWLDG HNAIGVLVLP FHLMISYSSL VLFMYMVMPA GIMASYGNDT DKYFNDLFGR NDAPKAAQVA TPLVALPSLY AKVQELQPGA RVGNIQVQNP GDSNARVTFT QSAADHVAYR RSANWTFDGA SGALLSQGKP ESGVMMTAFS FAGLHMGNFA GPWLRWLYFF FGVAGTAVIG TGLVMWLGKR QLKHAKNGHM PGELRLVEVL NIASMSGLLL AVASFFWANR LVPMAVEGRA DWEVNAFFIA WGLSLVHAVL RSGRKAWGEQ LALGALAFAL LPLLNGLTTD RGLNHSVLEG DWAMAGFDLT ALGTGLFLAW LARKMLVSPT PVAKRAARAA KKPSIETLGA S
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