| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3988 |
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| Symbol | |
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| ID | 1046575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4497954 |
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| End bp | 4500002 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637147398 |
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| Product | hypothetical protein |
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| Protein accession | NP_746118 |
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| Protein GI | 26990693 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.544109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00814406 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGTCT CATTAGATGC AGTTGACGCT ACCGACGACT CTGAAGCGCT TATCAATGAG
AAGTTGGCTG AGGCGGTTGG CAGCGGTGGA ACTGTAAAGG CCAGGCTCAT GACTGATGAG
CGCGTCTTTG CGCGAATCAC GGATGGAATC TACCGTGATC CGGCTTCTGC ACTCCGGGAA
CTTATTGCCA ACGGTTATGA TGCCGACGCT ACGGAAGTCA GGGTTGAGAC AGATTTCCCA
CGATTTTCCA AAATATCCGT GCGTGACAAT GGCCGTGGGC TTACCAAGGA GACATTGGCT
CATGTGATTT GCCATATTGG CGGGAGCTTA AAGAGAACGA AGCAAGGTCA AGCACACCAG
ATTTCGAGTG AGGAAGACGC TTCTAGAAGT AAAGCAGGTC GCCCTTTGAT CGGGAAATTG
GGCATCGGTT TGTTCTCCGT TTCCCAGATC ACCCATCATG TGGTGATTAT CTCGAAGGTC
AAGGGCAGCA ATAAGAGGAT CTACTGTGAT ATTTTGCTGA TGCCTCAATC TGAGGCCCTT
CTTGAAAAAG AAGAGGGTCA GCAGTTTGTT ACCGGCGAAG TTCACATTAA ATTTGTCGAT
GCTGATGATG TTGACTCGCA TGGGACCGAA ATCTTGCTTC TTGATCTGCG GGAGCATGTC
AAGGAATCGC TACTTTCCAA GATGACTTGG GATGCGTTGC GGGAGAAGCA AGAGCTTGAA
AGCGATACAT CCAAAGATGA AGAGGCAGAA CTCGCGGTTG CCTTTGAGGA TGATGGTTTT
GAAGGTGGCA TAAATATCCG CGAACCGCTT TTTCATATTG GTGAGATTGA TGTTGAACAT
GGGGTCGTTC GAAAACCCTC AGTTCTGCCA TGGGATAACA ATACACCTGC GGATGAGAAG
TTTCGTGCCT TGGTGGAAAA GCTCTCATCA TCGTTAAATG AGTCAGATCG TTCCAGCAAA
GGGCCTAGTA CTCAAGAACA CCTTGATTAC TACTTAAGGA TGCTTTGGGT ATTGAGTCTT
TCTCTACCGT TGCCCTATCT TAAGAAGCAC CCTTTCGATA TTGATGCCAA TGACGGGGCA
TCGATTTTTC AAATTGATAA CAAACGGCGA GGGGCAGCGG TTGATGTGCT TCTCGAGGGC
GATCAGACGA TCGCACAGCG CTATAAGCTA AAGTCCAGAG AGTCCCACTC TTTGGAATTT
AATGTGTATG TGGACGGTGT TCGTCTCTAT CGCCCGTTGA GCTACGGGAA GTTCAAATCC
CTAGATCATG CCGTGAGTAA GCCGTTGGTT TTTGTGGGTC GAGCCAAACC AGATTTGAGC
GAGATACCCG AGCAATATCG TGGTGGGGAG TTAGAGTTTG AGGCGTATCT TTATTGGACG
AAGAAAATTG TCCCCAAGGA GCACAATGGC GTGCTTATCA GAATCAATGG CGCCAGCGGA
ACGTTGTTTG ATGAGAGTTT TTTGAAGTAT CAGGTTTCTG AGCTTACTAG GTTGCGGCAG
ATTTCTGCAG AGATTTTTGT GATCAAAGGT TTAGATGCTG CGCTAAATAT TGATAGGGAA
TCTTTCAATG TTTCGCATCC GCATTATCAG ATCATAAAAA ACTGGCTGCA CAGTGCATTG
CGGCAGTTGA TGAATAAGCA TAAATATTTG TCTGGTGCTG TTAGCAAGAG TGCGCTTGAT
GAAAGAAAAA AACAAACATT TGCTGAATTG CGAAACATTG TAACGGATCA GATAAAAAGC
GTCGGTTTGA CGGCAGTTCC AGCAAGGGAA GTAGTTTATA GCTCGGGCAC TGTAGTGCAG
GAGCGCTCGG TTGATCCTGG TCAGCCTGCT ACGCTTGAGT TAAACCGTGA AAAAGCCCTT
GCTCCCATAT TCAAGTCTAA GAACTCTACG CCTAAAGAAA AGGTCCAGCA AATTCTCAAT
GAAGAGAAAG CTAAGGCACT GGCATCAATT CTTAGTGCTT ATGGAGTTGA TCAGCACTTG
GCAAAGGAGA AGCTGGAGGC TTTGATTTCA GCCATTCTGG AAGTGATGGT TCTGGAGATT
CGAAAGTGA
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| Protein sequence | MDVSLDAVDA TDDSEALINE KLAEAVGSGG TVKARLMTDE RVFARITDGI YRDPASALRE
LIANGYDADA TEVRVETDFP RFSKISVRDN GRGLTKETLA HVICHIGGSL KRTKQGQAHQ
ISSEEDASRS KAGRPLIGKL GIGLFSVSQI THHVVIISKV KGSNKRIYCD ILLMPQSEAL
LEKEEGQQFV TGEVHIKFVD ADDVDSHGTE ILLLDLREHV KESLLSKMTW DALREKQELE
SDTSKDEEAE LAVAFEDDGF EGGINIREPL FHIGEIDVEH GVVRKPSVLP WDNNTPADEK
FRALVEKLSS SLNESDRSSK GPSTQEHLDY YLRMLWVLSL SLPLPYLKKH PFDIDANDGA
SIFQIDNKRR GAAVDVLLEG DQTIAQRYKL KSRESHSLEF NVYVDGVRLY RPLSYGKFKS
LDHAVSKPLV FVGRAKPDLS EIPEQYRGGE LEFEAYLYWT KKIVPKEHNG VLIRINGASG
TLFDESFLKY QVSELTRLRQ ISAEIFVIKG LDAALNIDRE SFNVSHPHYQ IIKNWLHSAL
RQLMNKHKYL SGAVSKSALD ERKKQTFAEL RNIVTDQIKS VGLTAVPARE VVYSSGTVVQ
ERSVDPGQPA TLELNREKAL APIFKSKNST PKEKVQQILN EEKAKALASI LSAYGVDQHL
AKEKLEALIS AILEVMVLEI RK
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