Gene PP_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3758 
Symbol 
ID1046304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4286507 
End bp4287733 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content61% 
IMG OID637147166 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionNP_745888 
Protein GI26990463 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.734482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGCC ACACCACCGC CAAACTGCTG ATTGTCGACG ACTTGCCGGA AAACCTGCTG 
GCGCTCGATG CCCTGATCCA GGGCGAGGAC CGCGAGGTGC ACCAGGCACA GTCTGCCGAG
GCTGCCTTGT CGTTGCTGCT GGAGCACGAG TTCGCACTGG CCATTCTCGA TGTGCAGATG
CCGGGCATGA ACGGTTTCGA ACTGGCCGAG CTGATGCGCG GTACCGACAA GACCAAGCAC
ATCCCGATCG TCTTCGTCAG CGCGGCGGGC CGCGAGATGA ATTATGCCTT CAAGGGCTAC
GAGAGCGGGG CCGTGGACTT TCTGCACAAG CCGCTCGACA CCCTGGCGGT AAAAAGCAAG
GTCTCGGTGT TCGTCGACCT GTTCCGCCAG CGCAAGGTGC TTGGCCGGCA GCTGGAAGCC
CTGGAGCAGA GCCGCCAGGA ACAGGAGCTG CTGCTCAGCC AGCTGCAGGT GGCACGGTGT
GAGCTGGAGC ACGCCGTGCG CATGCGTGAC GACTTCATGT CGATCGTCTC CCACGAGGTG
CGTACGCCGC TCAATGGCCT GATTCTGGAA ACCCAGTTGC GCAAGATGCA CCTGGCACGG
GGCAACCTGG ACGCGTTCAG TGTCGACAAG CTGCAGGCCA TGGTCGAGCG CGACGAACGG
CAGATCAACA GCCTGATCCG GTTGGTCGAG GACATGCTCG ATGTTTCGCG CATCCGGACC
GGTAAACTTT CGCTGCGGCC CAAACTGTTT GACCTGGGCC AGCTGGTGCG TGGGCTGGTG
GAAAACTTCA CGGCGCAGGC CATGGCCCTG GAAACACACA TCGAATTGCA GCGTTGCGAA
GCACTGAAGG GGGAGTGGGA CGAATTCCGG ATTGAACAAG TAGTGGCCAA CCTGTTGTCC
AATGCAATGC GTTACGGCGA GCGCAATCCG GTGCAGGTGC GGGTGTTCGA GCAGGGCGGC
ATGGCCTGGG TGCAGGTGCA GGATCACGGT ATCGGTATCA GCGCCGCCAA CCAGCAGCGG
ATCTTCCAGC AGTTCGAGCG GGTCGCTGCC CAGCAGGCCA GCGGAGGTCT GGGCTTGGGG
CTGTACATCT CCGAGCAGAT CGTCCAGGCG CACGGTGGCC GGATACAGGT TGAAAGCGAG
GAGGGCAAGG GTGCCACATT CACCCTGCAA TTGCCGCTGG CAACATTCAA AGAACAAAAC
GACCAGGCGC GGGCAACCTC TGTGTAA
 
Protein sequence
MLSHTTAKLL IVDDLPENLL ALDALIQGED REVHQAQSAE AALSLLLEHE FALAILDVQM 
PGMNGFELAE LMRGTDKTKH IPIVFVSAAG REMNYAFKGY ESGAVDFLHK PLDTLAVKSK
VSVFVDLFRQ RKVLGRQLEA LEQSRQEQEL LLSQLQVARC ELEHAVRMRD DFMSIVSHEV
RTPLNGLILE TQLRKMHLAR GNLDAFSVDK LQAMVERDER QINSLIRLVE DMLDVSRIRT
GKLSLRPKLF DLGQLVRGLV ENFTAQAMAL ETHIELQRCE ALKGEWDEFR IEQVVANLLS
NAMRYGERNP VQVRVFEQGG MAWVQVQDHG IGISAANQQR IFQQFERVAA QQASGGLGLG
LYISEQIVQA HGGRIQVESE EGKGATFTLQ LPLATFKEQN DQARATSV