Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2754 |
Symbol | |
ID | 1041993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3137769 |
End bp | 3139208 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637146176 |
Product | porin, putative |
Protein accession | NP_744898 |
Protein GI | 26989473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTTT TTTGTTGGCA TGGTTGTTGG AACAACGGGA TCTGCAGCGC CTGGAAAGGC GCCTACCTCG TCATTCCAAG GATCACTGCC ATGCGCTCTA CCGTTTGCTA CAGAACAGCT CTTTCTCTGG CCATCCTGCT GGCCAGCCCC GCTTTTGCCG ACAGCGATGA TGAAGGCTTC ATCGACGGCA CGCGGGTCCA TGTGCTCAAC CGCAATTTCT TCTTCAGCCA GGACTATCGC AACGGCGACT TTACACTCAA TCCCAATAAT GGCGAGCGGC AGAGCCTGCA TCGTGAATGG GGCCACGGCA TCATCGCCAA TCTGCAATCC GGTTTCACCC GTGGCACTGT CGGCTTCGGC GTGGATGTGC AGGGGCTGGT CGGGCTCAAG CTCGATGGCG GCAATGGGGC GGTCGGCAAT GGTGTCGGCG TGCCTGGCAT CGTGTCGCGC TCGGGGAGCA ACTTCGATGG CGAGCCGAAG GACAGCTACG GCAAGGTTGG CACCGCGCTC AAGGTGCGCG CCTTCGACAC CGAGCTGCGC TATGGCGACG TCAGCCCGAC CAGCCCGGTG CTGCACGCCA GCGACATTCG CCTGCTGCCG CAGACGCTGC GCGGCTTCAT CTTCAACAAC AACTCGCTGG ATGGCCTGAG CCTGCAGGGC GGCAAGCTGG AGTCGAGCAG TGACCGCAAC GCCAGCAACC ACCGTGGTGA TCTCGGCACC GTCTATGCCG GGCGTATCAA GGGCGCCAAC GATGTGGTGT ACCTGGGTGG CGATTACCGG TTCAACGACC AGCTCACCTT GCGCCTGCAC AGCAGCCGCC TCGACGACGT ATGGAACCAG TCGTTCTTCA GCGTCGACCA TGTGCAGCCG CTGGGTAGCG AGCTGAGCCT GAAGACCGGC CTCAATTATT ACCGCACCCG TGACAGCGGC CAGGCGCTGG CCGGCCAGAT CGACAACGAC TCATGGAGCG TGCATGCCGG TCTGGCTGCC GGCGCTCATG GCTTCAAGCT GTCCTACACG CGCATCGATG GCGACACGCC GTTCGACTAC GTGTGGAACA CCTATGACCT GCAGCTGGAT GCCGCCTCGC AGGTTTCCGA CTTCAATAAC CCCAATGAGC GAGCCTGGGA AGCCCGTTAC GACTATGACT TCGCCCCGCT TGGCGTCCCT GGGCTGAGCC TGACGGCCCG CTACGTACGC GGTACCGACA TCGACGGCAC GCGCGCCGGT GGCGCTTACA GCTACTTCAA TGGAACCGAG GACGGCCGCC ACTGGGAGCG CAACCTGTGG CTGAAGTACG TGCTGCAGAG TGGGCCGGCC AAGGACCTCT CGTTCAACCT GATGCAGGCC ACCCACCGCG TCGGTGGCGA TCACGTCGCC GAGTCCAATG TCGACGAACT GCGCCTGATC GTCCAGTACC CGCTGGATAT CAGCCTCTGA
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Protein sequence | MVFFCWHGCW NNGICSAWKG AYLVIPRITA MRSTVCYRTA LSLAILLASP AFADSDDEGF IDGTRVHVLN RNFFFSQDYR NGDFTLNPNN GERQSLHREW GHGIIANLQS GFTRGTVGFG VDVQGLVGLK LDGGNGAVGN GVGVPGIVSR SGSNFDGEPK DSYGKVGTAL KVRAFDTELR YGDVSPTSPV LHASDIRLLP QTLRGFIFNN NSLDGLSLQG GKLESSSDRN ASNHRGDLGT VYAGRIKGAN DVVYLGGDYR FNDQLTLRLH SSRLDDVWNQ SFFSVDHVQP LGSELSLKTG LNYYRTRDSG QALAGQIDND SWSVHAGLAA GAHGFKLSYT RIDGDTPFDY VWNTYDLQLD AASQVSDFNN PNERAWEARY DYDFAPLGVP GLSLTARYVR GTDIDGTRAG GAYSYFNGTE DGRHWERNLW LKYVLQSGPA KDLSFNLMQA THRVGGDHVA ESNVDELRLI VQYPLDISL
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