Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2239 |
Symbol | |
ID | 1045115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2547311 |
End bp | 2548198 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637145653 |
Product | EamA family protein |
Protein accession | NP_744388 |
Protein GI | 26988963 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0001908 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCC AACCCCGCAG CCTGGCCGCC ACCCTCTTCC CGATCGGCCT ACTGCTTATC GCCATGGCAT CGATTCAGTC CGGCGCCTCC CTGGCCAAAA GCATGTTCCC GATCGTCGGC GCACAAGGCA CTACCACCCT GCGCCTGATC TTCGCCAGCA TCATCATGCT GCTTATATTG CGCCCGTGGC GGGTACGCAT GACCGCCAAC ACGTTGCGCA ATGTGGTCAT CTACGGCATG GCACTGGGCG GCATGAACTT CCTCTTCTAT ATGGCCCTGC AAACGGTACC AATCGGTATC GCCGTCGCCC TGGAATTCAC CGGCCCGTTG GCCGTGGCGA TCTTCTCCTC GCGCCGAGCG ATCGATTTCC TGTGGATTGC CCTGGCCATC GCAGGCCTGC TGCTGTTGCT GCCGGCAGGT CACAGCGGCC AGGCACTCGA CCCAGTGGGC GCCGCCTATG CGCTGGGGGC GGGTGTGTGC TGGGCGCTGT ACATCCTGTT CGGGCAACGT GCAGGGGCCG AGCACGGCAT CCAGAGCGCG GCCCTGGGGG TGGTGGTAGC GGCCCTGTTC GTCGCCCCCA TCGGTATCGC CCACGCCGGT AGCGCTCTGC TCACACCTGC CGTGATCCCC ATGGCGTTTG CCGTTGCAAT ACTGTCCACC GCCCTGCCAT ACAGCCTGGA AATGGTTGCC CTCACGCGGA TTCCGGCGCG CACGTTCGGC ACCCTGATGA GCATCGAACC GGCATTTGGC GCATTGTCCG GCCTGCTTTT CCTCGGCGAG GTGCTGACGC TCACTCAATG GCTGGCGATT CTGGCAATCA TTACCGCCTC GGTCGGCACC ACCCTGTCCA TGCGCAAGGC GCCCAGCCCG GCCATCGCAG CAGACTGA
|
Protein sequence | MNTQPRSLAA TLFPIGLLLI AMASIQSGAS LAKSMFPIVG AQGTTTLRLI FASIIMLLIL RPWRVRMTAN TLRNVVIYGM ALGGMNFLFY MALQTVPIGI AVALEFTGPL AVAIFSSRRA IDFLWIALAI AGLLLLLPAG HSGQALDPVG AAYALGAGVC WALYILFGQR AGAEHGIQSA ALGVVVAALF VAPIGIAHAG SALLTPAVIP MAFAVAILST ALPYSLEMVA LTRIPARTFG TLMSIEPAFG ALSGLLFLGE VLTLTQWLAI LAIITASVGT TLSMRKAPSP AIAAD
|
| |