Gene PP_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_1552 
Symbol 
ID1045452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1751590 
End bp1752294 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID637144952 
ProductIstB domain protein ATP-binding protein 
Protein accessionNP_743709 
Protein GI26988284 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.1305e-05 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGATGG GGCGCGAGAT TGTTGGCCGC TGCCCTGAGT GCGAAAAGGC CGCCATTGCC 
GAGCGCCAGG CCAAGCAACA GGCCGAGGAA ACCCGCCTGA AGCGCGAGGC CATGACCCGC
AAGCTGGGTT CAGCGCTGAT ACCGAAGCGT TTCGCCGAGC GAACCCTGGC CAACTACCGT
GTCGAGCACG AAGGCCAGCG CAAGGCCCTG GCCTACTGCA CGCGTTACGT GGCCGCGTTC
GAGGAGATCG AGCGCACCGG GCGTTGCCTG ATGCTGCTGG GCAGGGTCGG CACCGGCAAG
ACCCACCTGG GCGCCGGTAT GGCCAACGAG CTGATGCGCA ACACCTCGGC TACCGCCGTG
TACCGCACGG TGGGCGCTGT CCTGCAGTCC ATCCGGGCGA CCTACGACCG CCACAGCGAG
CAGTCCGAGG CCGACATCCT GTCCAGCCTG ATCGAGCCAT CGCTGCTGGT GCTGGACGAA
GTCGGCGTCA GCAAGGAGCA GCCGAGCGAG TTCGAGCTGA CCACCCTGTT TTCGATCATC
AACGGGCGCT ACGAGCAAAT GCGCCCCACG GTGGTGATTT CCAACCTGGA AGCCAGCCAA
CTGCGCCACG CCATGGGCGA GCGGTGTTAT GACCGCCTGC GCGAGGGCGG CGGTGTGGTG
GTGCCCTTCG AGTGGGAGTC TCACCGTGGC AAGGAGGAGT TCTGA
 
Protein sequence
MLMGREIVGR CPECEKAAIA ERQAKQQAEE TRLKREAMTR KLGSALIPKR FAERTLANYR 
VEHEGQRKAL AYCTRYVAAF EEIERTGRCL MLLGRVGTGK THLGAGMANE LMRNTSATAV
YRTVGAVLQS IRATYDRHSE QSEADILSSL IEPSLLVLDE VGVSKEQPSE FELTTLFSII
NGRYEQMRPT VVISNLEASQ LRHAMGERCY DRLREGGGVV VPFEWESHRG KEEF