| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_1388 |
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| Symbol | |
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| ID | 1046139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 1583558 |
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| End bp | 1585009 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637144789 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_743547 |
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| Protein GI | 26988122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG CCCTGCCCCC CACCGCCCTG CGCAACGTGC TCACCGCCCT GATGCTGGCC
ATCTTCCTCG GCGCACTGGA CCAGACCATC GTCGCTGTCT CGCTGCCCGC CATCTCGGCG
CAGTTCAGCG ATGTCGGCCT GCTGGCCTGG GTCATCTCCG GTTATATGGT GGCCATGACC
GTGGCCGTGC CGATCTACGG CAAACTGGGC GACCTTTACG GCCGGCGCCG GATGATCCTC
ACCGGTATCA GCCTGTTCAC CCTGGCCTCC ATTGCCTGCG CCATGGCCCA GGACATGCCG
CAATTGGTGC TGGCCCGTGT ACTGCAGGGT ATCGGCGCAG GCGGGATGGT CTCGGTGAGC
CAGGCAATCA TTGGCGACTT CGTGCCCCCG CGCGAACGCG GCCGCTACCA GGGCTACTTC
AGCAGCATGT ACGCCGCGGC CAGCGTGGCC GGGCCAGTGC TGGGCGGCTG GTTGACCGAG
TACCTGTCGT GGCGCTGGGT GTTCTGGATC AACCTGCCGC TGGGGCTGGT TGCTTTGTGG
GCCATTCGCC GTGCGCTCGC TGACATGCCA GTGCAGCGTC GTGAGGCACA GGTGGACTAC
CTTGGCGCCA TGCTGTTGAT TCTCGGCCTT GGCAGCCTGC TGCTGGGCAT CACCTTGGTG
GGCCAGGGCC ACGCCTGGGC CGACCCGGCC GTGCTGGCGC TGTTCGGCTG CGCCCTGCTG
GGCCTGGCGC TATTCATCGC CCACGAACGC CGCTGCCCGG AGCCGCTGCT GCCGCTCAGC
CTGTTCGGCA ACCGTGTGGC AGTGCTGTGC TGGGCGGTGA TCTTCTTCGC CAGCTTCCAG
TCCATTTCGC TGACCATGCT CATGCCCCTG CGTTACCAGG GCATTACCGG CGCCGGTGCC
GACAGCGCCG CCCTGCATCT GCTGCCGCTG GCCATGGGGC TGCCCATGGG CGCCTTCACA
GGAGGCCGCA TGACCAGCCG GACCGGGCGC TACAAGCCAC AGATCCTGGC CGGTGCACTG
CTGATGCCAG TGGCCATTTT CGCGATGGCA CTGACCCCGC CGCAATCAGC GTTGCTCAGT
GCGCTATTCA TGCTGCTGAC CGGCATAGCC TGCGGGCTGC AATTCCCGAC CTCACTGGTG
GGCACACAAA GCGCGGTGGC CAGCAAGGAC ATCGGCGTGG CCACCAGCAC CACCAACCTG
TTCCGTTCGT TGGGTGGAGC CATGGGCGTG GCGTGCATGT CCAGCTTGTT GCTGGCACTG
CTGCATCAGG GTGGTTTCGA ACTGTCGGGT AATCCGTTGC TGGGGAGCTT GAAGGCCGCA
GAGGTGGACC CGGGGACGCA GGGGCGGTTG CTGGAAACGT TCCGGCAGCT GCTGATGGGG
AGTGCGGTCG TCGCGGTGCT GGGACTGCTT GCGGCACTGG CCTTGCCCGA CCGGCAATTG
CGCGGCCGCT GA
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| Protein sequence | MTAALPPTAL RNVLTALMLA IFLGALDQTI VAVSLPAISA QFSDVGLLAW VISGYMVAMT
VAVPIYGKLG DLYGRRRMIL TGISLFTLAS IACAMAQDMP QLVLARVLQG IGAGGMVSVS
QAIIGDFVPP RERGRYQGYF SSMYAAASVA GPVLGGWLTE YLSWRWVFWI NLPLGLVALW
AIRRALADMP VQRREAQVDY LGAMLLILGL GSLLLGITLV GQGHAWADPA VLALFGCALL
GLALFIAHER RCPEPLLPLS LFGNRVAVLC WAVIFFASFQ SISLTMLMPL RYQGITGAGA
DSAALHLLPL AMGLPMGAFT GGRMTSRTGR YKPQILAGAL LMPVAIFAMA LTPPQSALLS
ALFMLLTGIA CGLQFPTSLV GTQSAVASKD IGVATSTTNL FRSLGGAMGV ACMSSLLLAL
LHQGGFELSG NPLLGSLKAA EVDPGTQGRL LETFRQLLMG SAVVAVLGLL AALALPDRQL
RGR
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