| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_0553 |
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| Symbol | acoC |
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| ID | 1044339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 641878 |
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| End bp | 642984 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637143936 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | NP_742716 |
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| Protein GI | 26987291 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA TCCATACCCT GACTATGCCC AAGTGGGGCC TGTCGATGAC CGAGGGCCGG
GTGGACACCT GGCTCAAGCA GGAAGGTGAC GAAATCAGCA AGGGCGACGA GGTGCTGGAC
GTCGAGACCG ACAAGATCAG CAGCAGCGTC GAAGCGCCTT TCAGCGGCGT GCTGCGCCGC
CAGGTAGCCA AGCCGGATGA AACCCTGCCC GTCGGCGCAC TGCTGGCGGT GGTAGTCGAA
GGCGAAGCAG AGGAGGCCGA GATCGATGCC GTGGTACAGC GCTTCCAGGC CGAGTTCGTC
GCCGAAGGTG GCGCCGACCA AAGCCAGGGG CCGGCCCCTC AGAAGGCGGA AGTAGGCGGG
CGCCTGCTGC GCTGGTTCGA GCTGGGTGAA GGCGGTACAC CGCTGGTGCT GGTGCACGGG
TTTGGTGGTG ACCTCAACAA CTGGCTGTTC AACCACCCGG CGCTGGCTGC CGAGCGGCGG
GTCATCGCCC TCGACCTGCC GGGCCACGGC GAGTCGGCCA AGGCCCTGCA GCGGGGCGAC
CTGGATGAGT TGAGCGAAAC CGTGCTCGCC CTGCTCGACC ACCTGGACAT CGCCAAGGCC
CACCTGGCCG GCCATTCCAT GGGCGGAGCC GTCAGCCTCA ACGTGGCGCG CCTGGCCCCG
CAGCGGGTGG CCAGCCTGAG CCTGGTGGCC AGCGCCGGCC TGGGCGAAGC GATCAACGGG
CAGTACTTGC AAGGCTTCGT CACTGCGGCC AACCGCAATG CACTCAAACC GCAGATGGTG
CAGTTGTTTG CCGACCCGGC GCTGGTCACC CGGCAAATGC TGGAGGACAT GCTCAAGTTC
AAGCGCCTGG AAGGTGTGGA CCAGGCCCTG CAGCAACTGG CAGGGGCGCT CGCCGACGGC
GACCGGCAGC GCCATGACTT GCGCGGGGTC CTTGGCAATC ACCCGGCACT GGTGGTGTGG
GGTGGCAAGG ATGCGATCAT CCCGGCCAGC CATGCCGAGG GCCTGGAAGC CGAAGTACAG
GTGCTGCCAG AGGCCGGCCA CATGGTGCAG ATGGAGGCGG CCGAACAGGT CAACCAGCAA
CTGCTCGCAT TCCTGCGCAA GCACTAA
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| Protein sequence | MSQIHTLTMP KWGLSMTEGR VDTWLKQEGD EISKGDEVLD VETDKISSSV EAPFSGVLRR
QVAKPDETLP VGALLAVVVE GEAEEAEIDA VVQRFQAEFV AEGGADQSQG PAPQKAEVGG
RLLRWFELGE GGTPLVLVHG FGGDLNNWLF NHPALAAERR VIALDLPGHG ESAKALQRGD
LDELSETVLA LLDHLDIAKA HLAGHSMGGA VSLNVARLAP QRVASLSLVA SAGLGEAING
QYLQGFVTAA NRNALKPQMV QLFADPALVT RQMLEDMLKF KRLEGVDQAL QQLAGALADG
DRQRHDLRGV LGNHPALVVW GGKDAIIPAS HAEGLEAEVQ VLPEAGHMVQ MEAAEQVNQQ
LLAFLRKH
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