Gene PP_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0429 
Symbol 
ID1044158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp516207 
End bp516989 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID637143808 
Productshort chain dehydrogenase/reductase family oxidoreductase 
Protein accessionNP_742595 
Protein GI26987170 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.406504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTT ACGCCATGAT CACTGGTGCT TCCAGCGGCC TGGGCCTGGC CTTGGCGGAA 
GCGCTGGCAC GGCGCGGGCG CAATCTGATC CTGGTGGCAC GCCAACGAGA AACGCTGGAG
CCTGTTGCCA TCGAGCTGAC CCAGCGTTTC GGCGTCGAGG TGCTGTTCCG CGCCTGCGAC
CTCAGCCAGC CGCTGCGCCT TTCAGGCTTC GTGCTAGAGC TGGAAGAAGG CGAGCGGCGT
ATCGATTTGC TGGTCAACTG CGCGGGCTTG CGCACCTATG GGCCGTTCCT GGCCCATGAA
TGGGCCGACG AACAGGATCT GCTGGAAGTC AACGTGCTGG CCCTGAGCCG CCTGTGCCAT
GCCATCGGTA ACCTGATGGC TGTACAGGGT GGCGGGCAGA TTCTCAACGT CGCCGGCCTG
GCCGGGGTGG CGCCTGGCCC ATGGATGGCC GCCTATGCCG CCAGCAAGGC CTACGTGTTG
AGCTTTTCCC AGGCCCTGCG CGAAGAACTC AAGCGCACCG GCATCAAGGT CTCGGTACTG
TGCCCTGGCC CGGTACGTTC CGCACGCCGG CGCATTGCGC GGCTCGATGG CAAGCCGCGC
TGCCTCAGCC CCGAGGAAGT GGCGCTGTAC ACCGTGCGGG CACTGGACAA GAACCGCGCA
CTGATCATGC CCGGCCGGCG CAACCGCTGG CTGGCGTTCG CACCGCGGCT GCTGCCGCGC
TGGCTGGTGC GCAAGCTGGC CGGGGCCATC CACCGCCGCT ATTGCCCCTC AGGCATGGAA
TAG
 
Protein sequence
MTRYAMITGA SSGLGLALAE ALARRGRNLI LVARQRETLE PVAIELTQRF GVEVLFRACD 
LSQPLRLSGF VLELEEGERR IDLLVNCAGL RTYGPFLAHE WADEQDLLEV NVLALSRLCH
AIGNLMAVQG GGQILNVAGL AGVAPGPWMA AYAASKAYVL SFSQALREEL KRTGIKVSVL
CPGPVRSARR RIARLDGKPR CLSPEEVALY TVRALDKNRA LIMPGRRNRW LAFAPRLLPR
WLVRKLAGAI HRRYCPSGME