Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0429 |
Symbol | |
ID | 1044158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 516207 |
End bp | 516989 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637143808 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | NP_742595 |
Protein GI | 26987170 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.406504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTT ACGCCATGAT CACTGGTGCT TCCAGCGGCC TGGGCCTGGC CTTGGCGGAA GCGCTGGCAC GGCGCGGGCG CAATCTGATC CTGGTGGCAC GCCAACGAGA AACGCTGGAG CCTGTTGCCA TCGAGCTGAC CCAGCGTTTC GGCGTCGAGG TGCTGTTCCG CGCCTGCGAC CTCAGCCAGC CGCTGCGCCT TTCAGGCTTC GTGCTAGAGC TGGAAGAAGG CGAGCGGCGT ATCGATTTGC TGGTCAACTG CGCGGGCTTG CGCACCTATG GGCCGTTCCT GGCCCATGAA TGGGCCGACG AACAGGATCT GCTGGAAGTC AACGTGCTGG CCCTGAGCCG CCTGTGCCAT GCCATCGGTA ACCTGATGGC TGTACAGGGT GGCGGGCAGA TTCTCAACGT CGCCGGCCTG GCCGGGGTGG CGCCTGGCCC ATGGATGGCC GCCTATGCCG CCAGCAAGGC CTACGTGTTG AGCTTTTCCC AGGCCCTGCG CGAAGAACTC AAGCGCACCG GCATCAAGGT CTCGGTACTG TGCCCTGGCC CGGTACGTTC CGCACGCCGG CGCATTGCGC GGCTCGATGG CAAGCCGCGC TGCCTCAGCC CCGAGGAAGT GGCGCTGTAC ACCGTGCGGG CACTGGACAA GAACCGCGCA CTGATCATGC CCGGCCGGCG CAACCGCTGG CTGGCGTTCG CACCGCGGCT GCTGCCGCGC TGGCTGGTGC GCAAGCTGGC CGGGGCCATC CACCGCCGCT ATTGCCCCTC AGGCATGGAA TAG
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Protein sequence | MTRYAMITGA SSGLGLALAE ALARRGRNLI LVARQRETLE PVAIELTQRF GVEVLFRACD LSQPLRLSGF VLELEEGERR IDLLVNCAGL RTYGPFLAHE WADEQDLLEV NVLALSRLCH AIGNLMAVQG GGQILNVAGL AGVAPGPWMA AYAASKAYVL SFSQALREEL KRTGIKVSVL CPGPVRSARR RIARLDGKPR CLSPEEVALY TVRALDKNRA LIMPGRRNRW LAFAPRLLPR WLVRKLAGAI HRRYCPSGME
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