Gene PP_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0176 
Symbol 
ID1043702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp227174 
End bp229261 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content65% 
IMG OID637143554 
Productfusaric acid resistance protein region 
Protein accessionNP_742345 
Protein GI26986920 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.314543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTT TCTTCAGCTC TGTCCCTCCG GCCCGTGACT GGTTCTACGG CGTGCGCACC 
TTCGGCGCGT CCATGATTGC CCTGTACATT GCCCTGCTCA TGCAACTGCC GCGTCCCTAC
TGGGCCATGG CGACGGTGTA CATCGTCTCC AGCCCCTTCG TCGGCCCGAC CAGCTCCAAG
GCGTTGTACC GTGCCGTCGG CACGTTGCTC GGCGCTGGCG GGGCAATCTT CCTGGTGCCG
CCGCTGGTGC AGTCACCGTT GCTGCTGAGC ATCGCCGTTG CCCTGTGGAC CGGCACCTTG
CTGTTCCTTT CGCTGAACCT GCGCACGGCC AACAACTACG TGCTGATGCT GGCCGGTTAT
ACCCTGCCGA TGATTGCCTT GGCCGTGGTG GATAATCCGC TGGCAGTGTT CGATGTGGCT
TCTTCTCGTG CGCAGGAAAT CTGTTTGGGA ATTGTCTGCG CGGCAGTCGT CGGGGCTATC
TTCTGGCCAC GCCGGCTGGC GCCGGTGGTA GTCGGTGCCA CCGGAAACTG GTTCAACGAG
GCGATTCGCT ACAGCGACAC CTACCTGGCC CGCGATGCCA GCGCTGACAA GGTCGGCGGT
ATGCGCGGGG CGATGGTCAC TACCTTCAAC TCGCTGGAGC TGATGATCGG TCAGCTCGCC
CACGAAGGTG CCGGCCCGCA TACCCTGAAG AACGCCCGCG AATTGCGTGG GCGGATGATC
CATCTGCTGC CGGTGATCGA CGCCCTCGAC GACGCACTGG TAGCCCTGGA AGGCCGCGCC
CCGGCCCAGT TCGCCCAGCT TCAACCCGTG CTGGAAGCCG CTCGTGAATG GCTCAAAGGC
ACCGCCGACA GCGCTTCGGT AGCGCACTGG GCCACGTTGC ACGAGCAGAT CGGCCGCCTG
CAGCCCGCTA CAGCCGCCCT CGACCAGCGC GCCGAGCTGC TGTTGTCCAA CGCCCTGTAC
CGCCTGACCG AATGGGCCGA CCTGTGGCAG GACTGCTGCA CCCTGCAGCA CGCCCTGCGT
ACCGATGATG CCAAGCCTTG GCGTGCGGTG TATCGCCACT GGCGGCTGGG CCGCCTGACA
GCGTTTTTCG ATCGTGGCCT GATGCTCTAC TCGGTAGCCT CCACGGTTCT GGCGATCGTG
GTCGCCTGCG GCCTGTGGAT CGGCCTGGGC TGGAACGACG GCGCCAGTGC GGTAATCCTC
GCGGCAGTTG CGTGCAGCTT CTTCGCCGCC ATGGACGACC CGGCACCGCA GATCTACCGG
TTCTTTTTCT GGACGCTGAT GTCGGTCATC TTCTCCAGTC TGTACCTGTT TTTGGTACTG
CCCAACCTGC ACGACTTCCC GATGCTGGTG CTGGCCTTTG CCGTGCCGTT CATCTGCATA
GGCACCCTGA CCGTACAGCC GCGCTTCTAC CTGGGCACCT TGCTGACCAT CGTCAACACG
TCGACCTTCA TCAGCATCCA GGGTGCCTAC GACGCCGACT TCTTTACCTT CCTCAACTCC
AACCTTGCCG GCCCCGCGGG CCTTCTGTTC GCCTTTATCT GGACCCTGGT GATGCGCCCG
TTCGGCGTGG AACTGGCGGC CAAGCGCATG ACCCGCTTCG CCTGGCGCGA CATCGTCGAA
ATGACCGAGC CTGCGACATT GGCCGAACAC CGCCAGGTTG GCGTACAGAT GCTCGACCGC
CTGATGCAGC ACCTGCCACG TCTGTCGCAA ACCGGCCAAG ACAGTGGTGT GGCACTGCGT
GACCTGCGCG TAGGGTTGAA CCTGCTCGAC CTGCTGGCGT ACATGCCGCG CGCCGGCCAG
CAGGCTCGCG AGCGCCTGAA CACTGTGGTC GAGGAAGTCG GTGCGCACTA CGCCGCCTGC
CTGCGTGCTG GCGAACGCCT GCATGCCCCG GCCGCACTGC TGCGCAACAT GGAACGCGCT
CGCCTGGCGC TGAACCTGGA TGAGCTGTAC GAGCGCGGCG ATGCCCGCAC CCACCTGCTG
CATGCCCTGA GTGGCCTGCG CCTGGCGCTA CTGCCGGGGG TGGAGGTGAT GCTCGAACCC
GCCGAACAAC CGCAACTGCC CCCCGGGCTC GACGGAGCGC CCTTGTGA
 
Protein sequence
MNGFFSSVPP ARDWFYGVRT FGASMIALYI ALLMQLPRPY WAMATVYIVS SPFVGPTSSK 
ALYRAVGTLL GAGGAIFLVP PLVQSPLLLS IAVALWTGTL LFLSLNLRTA NNYVLMLAGY
TLPMIALAVV DNPLAVFDVA SSRAQEICLG IVCAAVVGAI FWPRRLAPVV VGATGNWFNE
AIRYSDTYLA RDASADKVGG MRGAMVTTFN SLELMIGQLA HEGAGPHTLK NARELRGRMI
HLLPVIDALD DALVALEGRA PAQFAQLQPV LEAAREWLKG TADSASVAHW ATLHEQIGRL
QPATAALDQR AELLLSNALY RLTEWADLWQ DCCTLQHALR TDDAKPWRAV YRHWRLGRLT
AFFDRGLMLY SVASTVLAIV VACGLWIGLG WNDGASAVIL AAVACSFFAA MDDPAPQIYR
FFFWTLMSVI FSSLYLFLVL PNLHDFPMLV LAFAVPFICI GTLTVQPRFY LGTLLTIVNT
STFISIQGAY DADFFTFLNS NLAGPAGLLF AFIWTLVMRP FGVELAAKRM TRFAWRDIVE
MTEPATLAEH RQVGVQMLDR LMQHLPRLSQ TGQDSGVALR DLRVGLNLLD LLAYMPRAGQ
QARERLNTVV EEVGAHYAAC LRAGERLHAP AALLRNMERA RLALNLDELY ERGDARTHLL
HALSGLRLAL LPGVEVMLEP AEQPQLPPGL DGAPL