Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_0176 |
Symbol | |
ID | 1043702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 227174 |
End bp | 229261 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637143554 |
Product | fusaric acid resistance protein region |
Protein accession | NP_742345 |
Protein GI | 26986920 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.314543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGTT TCTTCAGCTC TGTCCCTCCG GCCCGTGACT GGTTCTACGG CGTGCGCACC TTCGGCGCGT CCATGATTGC CCTGTACATT GCCCTGCTCA TGCAACTGCC GCGTCCCTAC TGGGCCATGG CGACGGTGTA CATCGTCTCC AGCCCCTTCG TCGGCCCGAC CAGCTCCAAG GCGTTGTACC GTGCCGTCGG CACGTTGCTC GGCGCTGGCG GGGCAATCTT CCTGGTGCCG CCGCTGGTGC AGTCACCGTT GCTGCTGAGC ATCGCCGTTG CCCTGTGGAC CGGCACCTTG CTGTTCCTTT CGCTGAACCT GCGCACGGCC AACAACTACG TGCTGATGCT GGCCGGTTAT ACCCTGCCGA TGATTGCCTT GGCCGTGGTG GATAATCCGC TGGCAGTGTT CGATGTGGCT TCTTCTCGTG CGCAGGAAAT CTGTTTGGGA ATTGTCTGCG CGGCAGTCGT CGGGGCTATC TTCTGGCCAC GCCGGCTGGC GCCGGTGGTA GTCGGTGCCA CCGGAAACTG GTTCAACGAG GCGATTCGCT ACAGCGACAC CTACCTGGCC CGCGATGCCA GCGCTGACAA GGTCGGCGGT ATGCGCGGGG CGATGGTCAC TACCTTCAAC TCGCTGGAGC TGATGATCGG TCAGCTCGCC CACGAAGGTG CCGGCCCGCA TACCCTGAAG AACGCCCGCG AATTGCGTGG GCGGATGATC CATCTGCTGC CGGTGATCGA CGCCCTCGAC GACGCACTGG TAGCCCTGGA AGGCCGCGCC CCGGCCCAGT TCGCCCAGCT TCAACCCGTG CTGGAAGCCG CTCGTGAATG GCTCAAAGGC ACCGCCGACA GCGCTTCGGT AGCGCACTGG GCCACGTTGC ACGAGCAGAT CGGCCGCCTG CAGCCCGCTA CAGCCGCCCT CGACCAGCGC GCCGAGCTGC TGTTGTCCAA CGCCCTGTAC CGCCTGACCG AATGGGCCGA CCTGTGGCAG GACTGCTGCA CCCTGCAGCA CGCCCTGCGT ACCGATGATG CCAAGCCTTG GCGTGCGGTG TATCGCCACT GGCGGCTGGG CCGCCTGACA GCGTTTTTCG ATCGTGGCCT GATGCTCTAC TCGGTAGCCT CCACGGTTCT GGCGATCGTG GTCGCCTGCG GCCTGTGGAT CGGCCTGGGC TGGAACGACG GCGCCAGTGC GGTAATCCTC GCGGCAGTTG CGTGCAGCTT CTTCGCCGCC ATGGACGACC CGGCACCGCA GATCTACCGG TTCTTTTTCT GGACGCTGAT GTCGGTCATC TTCTCCAGTC TGTACCTGTT TTTGGTACTG CCCAACCTGC ACGACTTCCC GATGCTGGTG CTGGCCTTTG CCGTGCCGTT CATCTGCATA GGCACCCTGA CCGTACAGCC GCGCTTCTAC CTGGGCACCT TGCTGACCAT CGTCAACACG TCGACCTTCA TCAGCATCCA GGGTGCCTAC GACGCCGACT TCTTTACCTT CCTCAACTCC AACCTTGCCG GCCCCGCGGG CCTTCTGTTC GCCTTTATCT GGACCCTGGT GATGCGCCCG TTCGGCGTGG AACTGGCGGC CAAGCGCATG ACCCGCTTCG CCTGGCGCGA CATCGTCGAA ATGACCGAGC CTGCGACATT GGCCGAACAC CGCCAGGTTG GCGTACAGAT GCTCGACCGC CTGATGCAGC ACCTGCCACG TCTGTCGCAA ACCGGCCAAG ACAGTGGTGT GGCACTGCGT GACCTGCGCG TAGGGTTGAA CCTGCTCGAC CTGCTGGCGT ACATGCCGCG CGCCGGCCAG CAGGCTCGCG AGCGCCTGAA CACTGTGGTC GAGGAAGTCG GTGCGCACTA CGCCGCCTGC CTGCGTGCTG GCGAACGCCT GCATGCCCCG GCCGCACTGC TGCGCAACAT GGAACGCGCT CGCCTGGCGC TGAACCTGGA TGAGCTGTAC GAGCGCGGCG ATGCCCGCAC CCACCTGCTG CATGCCCTGA GTGGCCTGCG CCTGGCGCTA CTGCCGGGGG TGGAGGTGAT GCTCGAACCC GCCGAACAAC CGCAACTGCC CCCCGGGCTC GACGGAGCGC CCTTGTGA
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Protein sequence | MNGFFSSVPP ARDWFYGVRT FGASMIALYI ALLMQLPRPY WAMATVYIVS SPFVGPTSSK ALYRAVGTLL GAGGAIFLVP PLVQSPLLLS IAVALWTGTL LFLSLNLRTA NNYVLMLAGY TLPMIALAVV DNPLAVFDVA SSRAQEICLG IVCAAVVGAI FWPRRLAPVV VGATGNWFNE AIRYSDTYLA RDASADKVGG MRGAMVTTFN SLELMIGQLA HEGAGPHTLK NARELRGRMI HLLPVIDALD DALVALEGRA PAQFAQLQPV LEAAREWLKG TADSASVAHW ATLHEQIGRL QPATAALDQR AELLLSNALY RLTEWADLWQ DCCTLQHALR TDDAKPWRAV YRHWRLGRLT AFFDRGLMLY SVASTVLAIV VACGLWIGLG WNDGASAVIL AAVACSFFAA MDDPAPQIYR FFFWTLMSVI FSSLYLFLVL PNLHDFPMLV LAFAVPFICI GTLTVQPRFY LGTLLTIVNT STFISIQGAY DADFFTFLNS NLAGPAGLLF AFIWTLVMRP FGVELAAKRM TRFAWRDIVE MTEPATLAEH RQVGVQMLDR LMQHLPRLSQ TGQDSGVALR DLRVGLNLLD LLAYMPRAGQ QARERLNTVV EEVGAHYAAC LRAGERLHAP AALLRNMERA RLALNLDELY ERGDARTHLL HALSGLRLAL LPGVEVMLEP AEQPQLPPGL DGAPL
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