Gene PP_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0002 
Symbol 
ID1043469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp1029 
End bp1820 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID637143374 
ProductParA family protein 
Protein accessionNP_742172 
Protein GI26986747 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.442351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000159031 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGG TATTCGCAAT CGCGAACCAG AAAGGTGGTG TGGGCAAGAC AACCACCTGT 
ATCAATCTCG CCGCCTCGCT GGCTGCGACC AAGCGTCGTG TCCTGCTGAT CGACCTCGAT
CCGCAGGGCA ACGCCACCAT GGGCAGCGGT GTGGACAAGC ACGAGCTCGA GCATTCGGTC
TACGACCTGC TCATCGGGGA GTGCGACTTG GCCCAGGCTA TGCACTACTC CGAGCACGGA
GGCTTCCAGT TGCTGCCGGC CAACCGTGAC CTGACCGCCG CTGAGGTGGT GCTGCTGGAA
ATGCAGGTCA AGGAAAGCCG TCTGCGCAAC GCCCTGGCGC CTATTCGCGA TAACTACGAC
TACATCCTCA TCGACTGCCC GCCGTCGCTG TCGATGCTCA CGCTGAATGC TCTGGTCGCT
TCCGATGGCG TGATTATCCC CATGCAGTGT GAGTACTACG CACTGGAAGG TCTCAGCGAC
CTTGTGGATA ACATCAAGCG TATCGCCGCC CGGTTGAACC CGGAGTTGAA GATCGAGGGC
CTGCTGCGGA CCATGTACGA TCCGCGTCTG AGCCTGAACA ACGATGTTTC GGCACAGTTG
AAGGAGCACT TTGGCCCTCA GCTGTACGAC ACGGTCATTC CGCGCAACAT TCGCTTGGCC
GAGGCCCCCA GCTTCGGCAT GCCAGCCCTT GCTTACGACA AGCAATCGCG GGGCGCGCTG
GCGTACCTGG CCCTGGCTGG GGAACTGGTA CGCCGTCAAC GCCGTCCATC ACGCACTGCA
CAAACAACTT AA
 
Protein sequence
MAKVFAIANQ KGGVGKTTTC INLAASLAAT KRRVLLIDLD PQGNATMGSG VDKHELEHSV 
YDLLIGECDL AQAMHYSEHG GFQLLPANRD LTAAEVVLLE MQVKESRLRN ALAPIRDNYD
YILIDCPPSL SMLTLNALVA SDGVIIPMQC EYYALEGLSD LVDNIKRIAA RLNPELKIEG
LLRTMYDPRL SLNNDVSAQL KEHFGPQLYD TVIPRNIRLA EAPSFGMPAL AYDKQSRGAL
AYLALAGELV RRQRRPSRTA QTT