Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2616 |
Symbol | secF |
ID | 2686284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2886169 |
End bp | 2887077 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637127306 |
Product | preprotein translocase subunit SecF |
Protein accession | NP_953661 |
Protein GI | 39997710 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATAA TCGGCAAAAC AAATTTCGAT TTCATGGGCA AAAAGAAGAT CACGTTCGTG ATCTCTTCCA TCATCGCATT GCTCGGACTG ATCGGCGTCG GACAGATTGC CCTGGGAACC GCCAACATGG GGATCGATTT TTCCGGCGGC ACCGCGGTCC AGCTCAACTT CAGCCAGCCG GTAGCCATCG ACCAGGCCCG GCACGCCTTG GCCAAGCACG GTTTCAAGGA CGCCAACCTT CAGGAGGTTT CCGGGGGCAA CAAGCTTCTC GTCAAGGTCG GCAAGGCCAC CCACGTTCAG GGGCCGGCAG CCGACGCCAT CGAAGATGCC TTCCGGAAGG AGTTCACCGA CAACCGGTTC GTGATCGAGA GCTCCACGGA GATCGGCCCG GCCATCGGCG ACAAGCTCCG CAAGGACACC CTCGTGGCAG TGGTCATTTC ACTGGTGGGC ATTGTCATCT ACATCGCCTG GCGCTTCGAC TTCGCCTTCG GCGTGGGTGC CCTGGCGGCG ACCCTTCACG ACGTGCTGGC CATGTTTGCC GTCTTCTTCG TCATGCAGAA GGAGATCAAC CTGCTCTTCA TCACGGCGGT GCTCACCATT GCCGGCTACT CGCTGACCGA TACGGTGGTC GTCTTCGACC GGATCAGGGA AAACCTGCAC AAGAACGTCA AGGATTCCCT GACGGCAATC TGCAACTTCA GCATCAACGA GGTCCTTTCC CGGACAATCA TTACCGCCCT GACCACGTTC CTGGCGACCG CCTCGCTCTT TTTCTTCGGT GGCGAGGTGA TTCACGACTT CGCCTTCGCG CTGCTGGTGG GCATCATCGT CGGTGTATAT TCATCCGTGT TCGTGGCGAG CCCCATTGTC GTGATCTGGG GGTCGCGGAA CAAGGAAACC AAGGCCTAG
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Protein sequence | MQIIGKTNFD FMGKKKITFV ISSIIALLGL IGVGQIALGT ANMGIDFSGG TAVQLNFSQP VAIDQARHAL AKHGFKDANL QEVSGGNKLL VKVGKATHVQ GPAADAIEDA FRKEFTDNRF VIESSTEIGP AIGDKLRKDT LVAVVISLVG IVIYIAWRFD FAFGVGALAA TLHDVLAMFA VFFVMQKEIN LLFITAVLTI AGYSLTDTVV VFDRIRENLH KNVKDSLTAI CNFSINEVLS RTIITALTTF LATASLFFFG GEVIHDFAFA LLVGIIVGVY SSVFVASPIV VIWGSRNKET KA
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