| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2253 |
|---|
| Symbol | |
|---|
| ID | 2687490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 2468454 |
|---|
| End bp | 2469569 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637126946 |
|---|
| Product | glycosyl transferase, group 1 family protein |
|---|
| Protein accession | NP_953302 |
|---|
| Protein GI | 39997351 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.531555 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGA ATACGGGCAC CGGCAGCAGA CTGACCGTCC TTTTCGCTGA GTCGTCCAAA
AATTTTGGCG GCCAGGAGCG GCGCATTGTC CACGAGGCGC GGCTGTTGAG GGATGCCGGG
CACCGTCCCC TCATCCTCTG CCCTCCCGAT GCGTTGCTCT GTGCGCGGGC GCAGGAGGCA
GGACTCATGG TAGTCGGCGT GCCCATGCGC AACGCGGTGC ACCCCGCAGC CCTCCGCTCG
TTCTGTACCG TTATCCGCCG CGAGGGGGTT GATGTTATCT ATTCCCACTC GGCAAAGGAT
TCATGGCTCG GCGGAATCGC TTCACTTCTC ACCGGAGTTC CGCTGGTCCG CAGCCGTGAA
CTCCTGAACC CCATCAAACG GGCCATCTCC TACAACCTCT TGCCGAAACG GGTGCTTGCC
TGCAGTAATG CCGTGCGGGA GCACCTGGTT GCCGCCGGCG TCGCCCCCCG CAAGATTCGC
GTGCAGTATC CACCCGTGGC CACGGCACGA TTTGCCTCGG TCACCGACGA GGAGCGGCTG
AATACCAGGC GCGAACTGGG ACTTGACGGT CACTTCCCCG TTATTGCCTG TGTGGCTGGG
TTTCGCACCG AGAAGCGCCA GGAAGACCTG ATCCGAGCCA TGGCGTTGAT CCGTCGCCCT
TTTCCGTCGG CGCGGCTCGT GCTGGCCGGA AGCGGGTGGT ATGTGGCGAA CTTACGGAGC
TTCGCCGAGG AGGCCGGAGT GACGGACTTG GTGGATTGCC CCGGCGAGCG CGAGGACGTG
CCGGCGCTGC TGGCGAACAC CGACGTGTTC GTGCTCCCTT CCTCCATGGA GCCCTTCGGT
ATGTCGCCGG TGGAGGCCAT GGCCGCCGGC GTGCCCGTGG TGGTAACCCG GACCGGGGGG
CTCGCCGAGA TCGTAACGGA CGGTGTGGAC GGTATTCAGG TGCCCGTGGG CGACCCCCCG
GCAATTGCTG ACGCAATCAT AAGGATCTGC AACGACAGGC AGCTCCGGGA CCGGCTCGCG
GCTGCCGGCC TGCGGCGAGC CTCCGACTTT GATGAAGCAC GGGCAATCGA GGCACTTCTC
GGCCATTTCA ACGACGTCAT CGCCCGAAGG ATCTGA
|
|---|
| Protein sequence | MDRNTGTGSR LTVLFAESSK NFGGQERRIV HEARLLRDAG HRPLILCPPD ALLCARAQEA
GLMVVGVPMR NAVHPAALRS FCTVIRREGV DVIYSHSAKD SWLGGIASLL TGVPLVRSRE
LLNPIKRAIS YNLLPKRVLA CSNAVREHLV AAGVAPRKIR VQYPPVATAR FASVTDEERL
NTRRELGLDG HFPVIACVAG FRTEKRQEDL IRAMALIRRP FPSARLVLAG SGWYVANLRS
FAEEAGVTDL VDCPGEREDV PALLANTDVF VLPSSMEPFG MSPVEAMAAG VPVVVTRTGG
LAEIVTDGVD GIQVPVGDPP AIADAIIRIC NDRQLRDRLA AAGLRRASDF DEARAIEALL
GHFNDVIARR I
|
|---|
| |