| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU2187 |
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| Symbol | |
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| ID | 2685754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 2396719 |
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| End bp | 2399238 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637126880 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_953236 |
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| Protein GI | 39997285 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.424379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCTGT GGCGCGCCGG CGCACGACAC CTGCTGCGAC ATCCACTGCT CGCCTTCCTG
TCGGTCATCG GCGTGGCCCT GGGGGTGGCG GTGGTCACTG CCGTGGACGT GGCCAACGAG
AGTGCGCACC GGGCCTTTCA GCTGGCTGCC GAGGCCGCGG CGGGGAAAGC CAGCCACCAG
ATCGTGGGCG GGCCCCGGGG GCTCGACGAG GATCTTTACC GCATTATCCG AGTCGAGCGC
GGGGTCCGGC CGGCAGCTCC CGTGGTGGAA GGAGTGGTCT CGGTCACGGG CCGTCCCGGC
ACCACTCTTC ACCTGATCGG CATCGATCCC CTGGTTGAGG CCCCCTTTCG CTCCCATACC
GCCCCGGTCG GGGGCCGCGT CGATCTGGCG GCCCTCATGG GAACGCCGGC AACGGGCCTG
CTCCTGCGGG AGACGGCGGA ACGTGTCGGC GCGGCAGTGG GCAAGCCTCT CCGGCTCGAC
GTGGGTGGCG TTTCCCGTTC CGTGGTGCTG GTCGGCTATC TGGAGGCCGG CGATGAACTG
GCCCGCCAGG GGCTGGCATC GGTGCTGGTG ACCGACATTG CCACGGCCCA GGAACTTCTG
GGCATGACGG GGCGGCTCTC CCGCATCGAC CTGATCCTGG CCGACGGGAA AGGGGTGGGC
GCCTTGCCTC CGGGGGCCAC GCTCATCCCG GCCGGTGCCC GGGCCGGAGC AATGGACCGG
ATGACCCGGG CGTTCCGCCT CAACCTCACC GCCCTCAGTT TCCTGGCCCT GCTGGTGGGG
ATGTTCCTCA TCTACAACGC CACCACCTTT GCCGTGGTCC GCCGGCGGCG CCTGATTGGG
CTCATGCGGG CCATGGGGGT CACCCGCAGG GAAATCTTCG GCCAGGTCTG CGTCGAAGCC
CTGCTGACCG GCCTCATCGG CACCGCCGCG GGGATCGCTC TCGGCCTCGC CCTGGGGGAA
GTGCTCACCC GTCTCGTAAC CCGCACCATC AATGATCTCT ACTTCGTACT GGAGGTGCAG
CAGGTTGCGC TTTCGGCGAC AACCCTGGCC AAGGGGTGTC TTCTGGGCAT CGCGGCCACT
GTGGCGGCAG CGGTTCCGCC CGCCCTGGAG GCGACTGCTG CGCCGCCGCG CGCCGTCCTG
TCCCGCTCAT TCATCGAGGC CCGTACCCGT CGGCACGTAC CCCGTGCGGC CCTTGCCGGG
CTGGCGGCCA TGCTCGGGGG CGCACTGCTC CTGGCAACGG GATTCGGCGG GCTCGCGGCG
GGGTTCACGG GGCTTTTCGC GCTCATCCTC GGCTATGCCC TGACGGTTCC TTTCGGCACG
GTCCTGGTGG CCCGCGCCAT GAAACCGCCC ATGGGGCTGC TCTTCGGCAA CCTGGGCCGC
ATGGCCGCCC GGGGCGTCGT TGTTTCACTC TCCCGCACCG GCGTGGCCAC GGCTGCCCTG
GTGGTGGCGG TGTCGGCCAC CATTGGCGTG GGGATCATGG TGGACAGCTT CCGCCACACC
GTGCAGCAAT GGCTGGCCGG GCGGCTGAAG GCCGATATCT ACGTGACCAC CGCCGGCACC
GGCACGGGGC GCGACAAACC GCCGCTGGAC CCGGCCCTGG TGGAGCGGCT CCGTTTGGTT
CCTGGCGCAG CCGCGGTCAG TACCACCCGG AGGATCACCA TCCAGTCGGC CGGAGGGGAG
ACCGATCTGC TGGTGCTCGG CATCCCCCGG CGTACCTTTG ACGGTTTTCG CCTTAAGGAG
GGAACGCCGG ACCGGGCCTG GCAGTCCTTC AGCAGCGGCG AAGGGATCAT CGTGTCCGAG
CCCTTCGCTT TCCGTCACCG TCTCGGACTC GGCGATGCCG TGCGGCTGCG GACCGACCGG
GGCGAACGGG ACTTCACCGT GGCCGGCGTG TTCTACGATT ACGGCTCGGA CAGCGGTTTC
GTGGCCATGG ACCGGGGCGC CTTCAACCGC TACTGGGACG ACCGGAGCGT GGACGGCATG
GGGCTGTACG CGGCGCCGGG CATCTCCTCA GCGCAACTGG CCGAGGCGGT CCGCGCCCGC
AGCGGCAGCG CCCGGGTCAG CATTATTTCC AGCCGAGAAC TGTATGAGGC ATCCGTGGCA
GTGTTCGACC GGACCTTCGT CATCACCGGC GTGCTGCGCC TGCTGACCGT GGTGGTGGCC
GTGGTCGGCA TCCTTTCGGC CCTCATGGCC ATGCAGGTGG AGCGGGCGCG TGAGCTGGCC
GTGCTGCGGG CCATGGGACT CACTCCGGCC GAACTCTGGG GGGTGGTCTG CGGGGAAACC
GGGCTCGTGG GGCTCGCGGC GGGGCTTCTG TCGCTGCCGC TCGGCATCCT TCAGGCCGCT
GTCCTCATCT ATGCCATTAA CCGCCGGTCC TTCGGCTGGA CAATGGAATT CTCCCTGTCC
CCGTCGATCT TCTGGCAGGC CATCGTGCTG GCGGTCGGCG CCGCGATCGT GGCGGGGATC
GTGCCCGCCC TGGCTACCGC TCGCGTCCCC CCGGCCCTTG CCTTCAAGGA GAATGAGTAG
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| Protein sequence | MILWRAGARH LLRHPLLAFL SVIGVALGVA VVTAVDVANE SAHRAFQLAA EAAAGKASHQ
IVGGPRGLDE DLYRIIRVER GVRPAAPVVE GVVSVTGRPG TTLHLIGIDP LVEAPFRSHT
APVGGRVDLA ALMGTPATGL LLRETAERVG AAVGKPLRLD VGGVSRSVVL VGYLEAGDEL
ARQGLASVLV TDIATAQELL GMTGRLSRID LILADGKGVG ALPPGATLIP AGARAGAMDR
MTRAFRLNLT ALSFLALLVG MFLIYNATTF AVVRRRRLIG LMRAMGVTRR EIFGQVCVEA
LLTGLIGTAA GIALGLALGE VLTRLVTRTI NDLYFVLEVQ QVALSATTLA KGCLLGIAAT
VAAAVPPALE ATAAPPRAVL SRSFIEARTR RHVPRAALAG LAAMLGGALL LATGFGGLAA
GFTGLFALIL GYALTVPFGT VLVARAMKPP MGLLFGNLGR MAARGVVVSL SRTGVATAAL
VVAVSATIGV GIMVDSFRHT VQQWLAGRLK ADIYVTTAGT GTGRDKPPLD PALVERLRLV
PGAAAVSTTR RITIQSAGGE TDLLVLGIPR RTFDGFRLKE GTPDRAWQSF SSGEGIIVSE
PFAFRHRLGL GDAVRLRTDR GERDFTVAGV FYDYGSDSGF VAMDRGAFNR YWDDRSVDGM
GLYAAPGISS AQLAEAVRAR SGSARVSIIS SRELYEASVA VFDRTFVITG VLRLLTVVVA
VVGILSALMA MQVERARELA VLRAMGLTPA ELWGVVCGET GLVGLAAGLL SLPLGILQAA
VLIYAINRRS FGWTMEFSLS PSIFWQAIVL AVGAAIVAGI VPALATARVP PALAFKENE
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